PDBsum entry 2p5g Go to PDB code:  Tunnel analysis for: 2p5g calculated with MOLE 2.0 PDB id 2p5g Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.26 1.26 24.9 -1.64 -0.72 19.8 75 4 1 0 0 0 0 0  DT 11 I DG 12 I DA 13 I DA 112 J DA 113 J 2 1.26 1.37 26.9 -1.51 -0.73 17.3 86 5 1 1 0 0 0 0  DT 11 I DG 12 I DA 13 I DC 14 I DA 112 J DA 113 J 3 1.17 1.17 41.1 -1.36 -0.57 15.2 72 5 0 1 0 2 1 0  DT 11 I DG 12 I DA 13 I DC 14 I DA 15 I DG 107 J DT 108 J DA 110 J DT 111 J DA 112 J DA 113 J 4 1.33 1.33 17.0 -1.17 -0.04 21.0 84 2 2 3 4 2 0 0   5 1.33 1.33 20.6 -0.63 -0.02 14.4 86 1 1 3 5 2 0 0   6 1.31 1.40 15.4 1.07 0.04 3.6 72 1 1 0 3 2 0 0  MSE 752 C 7 1.30 1.41 15.9 1.11 0.06 3.6 72 1 1 0 3 2 0 0  MSE 752 C 8 1.37 1.51 15.6 1.38 0.26 3.9 70 1 1 0 3 2 0 1  MSE 752 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.