 |
PDBsum entry 2ozm
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2ozm calculated with  MOLE 2.0
|
PDB id
|
|
|
|
2ozm
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
4 pores,
coloured by radius |
|
5 pores,
coloured by radius
|
5 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.13 |
2.38 |
25.9 |
0.20 |
0.28 |
9.6 |
77 |
|
1 |
2 |
2 |
6 |
2 |
1 |
0 |
|
|
 |
|
2 |
 |
2.90 |
3.12 |
32.1 |
-0.47 |
0.00 |
9.6 |
83 |
3 |
0 |
4 |
3 |
2 |
0 |
0 |
DT 11 P DA 12 P DA 13 P DC 4 T
|
|
3 |
 |
2.19 |
2.99 |
35.7 |
-1.49 |
-0.44 |
15.8 |
85 |
3 |
2 |
4 |
2 |
1 |
0 |
0 |
DT 11 P DA 12 P DC 4 T
|
|
4 |
 |
1.40 |
1.40 |
43.3 |
-1.65 |
-0.33 |
17.4 |
78 |
5 |
1 |
4 |
0 |
3 |
0 |
0 |
DT 11 P DA 12 P DC 1 T DG 2 T DC 4 T
|
 |
5 |
 |
1.29 |
3.19 |
71.8 |
-0.66 |
-0.01 |
13.0 |
78 |
5 |
4 |
5 |
7 |
5 |
1 |
0 |
DT 11 P DA 12 P DA 13 P DC 4 T
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program