 |
PDBsum entry 2os8
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2os8 calculated with MOLE 2.0
|
PDB id
|
|
|
|
2os8
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
11 pores,
coloured by radius |
 |
11 pores,
coloured by radius
|
11 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.43 |
1.67 |
25.9 |
-1.48 |
-0.60 |
18.7 |
89 |
 |
1 |
3 |
4 |
2 |
0 |
2 |
0 |
 |
|
 |
 |
2 |
 |
1.60 |
1.81 |
31.8 |
-1.74 |
-0.53 |
24.0 |
87 |
5 |
3 |
3 |
3 |
1 |
1 |
0 |
|
 |
3 |
 |
1.47 |
1.72 |
32.1 |
-2.00 |
-0.51 |
25.2 |
80 |
3 |
5 |
2 |
1 |
2 |
2 |
0 |
|
 |
4 |
 |
1.29 |
1.50 |
68.7 |
-1.17 |
-0.24 |
21.5 |
76 |
7 |
6 |
2 |
7 |
4 |
1 |
1 |
|
 |
5 |
 |
1.31 |
1.52 |
71.0 |
-1.16 |
-0.34 |
20.0 |
80 |
6 |
6 |
3 |
7 |
3 |
2 |
1 |
|
 |
6 |
 |
1.27 |
1.50 |
71.0 |
-1.12 |
-0.23 |
21.7 |
75 |
7 |
6 |
3 |
8 |
4 |
2 |
1 |
|
 |
7 |
 |
1.32 |
1.56 |
78.6 |
-1.38 |
-0.26 |
22.6 |
74 |
7 |
8 |
2 |
6 |
5 |
3 |
1 |
|
 |
8 |
 |
1.45 |
1.52 |
104.5 |
-1.22 |
-0.29 |
17.1 |
84 |
8 |
6 |
10 |
6 |
5 |
1 |
0 |
|
 |
9 |
 |
1.35 |
1.68 |
27.7 |
2.14 |
0.67 |
1.4 |
68 |
0 |
0 |
0 |
7 |
5 |
0 |
0 |
|
 |
10 |
 |
1.34 |
1.44 |
30.8 |
1.02 |
0.38 |
5.2 |
67 |
1 |
1 |
0 |
4 |
5 |
0 |
0 |
|
 |
11 |
 |
1.33 |
1.39 |
60.8 |
0.33 |
0.28 |
10.5 |
68 |
1 |
1 |
0 |
9 |
4 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |