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PDBsum entry 2iq7

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Pore analysis for: 2iq7 calculated with MOLE 2.0 PDB id
2iq7
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.24 2.28 32.8 -1.58 -0.58 16.2 94 5 2 5 1 0 0 0  
2 2.83 3.38 36.8 -1.10 -0.28 7.9 99 2 1 8 3 1 0 0  
3 3.18 3.33 39.0 -1.42 -0.81 11.8 95 3 3 6 0 0 0 0  PG4 3005 F
4 2.82 3.42 39.8 -1.71 -0.50 12.7 96 3 2 9 2 1 0 0  
5 2.20 2.20 44.4 -0.59 -0.44 11.6 90 2 3 4 3 1 2 0  
6 1.43 1.92 48.3 -1.62 -0.51 9.4 93 2 2 9 2 2 1 0  NAG 2 I
7 1.48 1.92 48.5 -0.95 -0.38 9.9 91 3 6 11 5 1 1 0  
8 4.48 4.48 50.8 -1.78 -0.55 11.7 94 4 1 13 2 2 0 0  NAG 1 N NAG 2 N
9 3.02 3.15 53.6 -2.39 -0.52 21.3 92 8 4 10 2 1 1 0  
10 1.79 1.83 54.0 -1.97 -0.69 14.7 96 6 1 10 0 1 0 0  PG4 3005 F NAG 1 N
11 3.37 3.73 57.2 -1.23 -0.42 8.1 95 3 4 13 4 1 0 0  NAG 1 I NAG 2 I
12 2.25 2.28 58.7 -1.43 -0.52 16.4 91 7 2 7 4 1 1 0  
13 1.82 3.97 62.4 -1.81 -0.48 18.2 87 6 3 7 3 3 0 0  NAG 2 H
14 2.25 2.25 63.3 -1.86 -0.46 10.0 94 3 1 9 0 3 0 0  PG4 3001 E NAG 1 H NAG 2 H MAN 3 H MAN 4 H MAN 5 H
15 2.22 2.22 70.0 -1.56 -0.54 16.8 89 6 3 8 3 2 2 0  PG4 3005 F
16 1.79 1.84 70.9 -2.11 -0.72 19.0 93 8 3 13 2 0 0 0  PG4 3005 F
17 3.26 5.25 71.1 -1.71 -0.65 14.0 93 7 2 10 2 2 2 0  NAG 1 N NAG 2 N
18 2.23 2.24 79.3 -2.26 -0.55 20.6 89 12 5 13 2 2 1 0  PG4 3005 F
19 3.11 3.20 80.4 -2.30 -0.62 18.5 92 13 4 14 1 2 1 0  NAG 1 N
20 1.81 4.24 79.7 -1.76 -0.68 13.6 97 5 4 17 4 0 0 0  NAG 2 H MAN 3 H MAN 4 H MAN 5 H MAN 6 H
21 2.23 2.24 84.4 -1.66 -0.55 17.5 89 11 3 10 4 2 1 0  PG4 3005 F
22 3.12 3.12 100.2 -1.67 -0.51 14.3 91 7 2 9 1 2 1 0  NAG 1 I NAG 2 I
23 3.24 3.35 101.7 -1.84 -0.65 13.9 96 10 4 19 0 2 0 0  PG4 3001 E NAG 1 H NAG 2 H
24 3.40 3.48 101.3 -1.66 -0.37 13.5 91 5 2 10 3 3 1 0  NAG 1 I NAG 2 I
25 2.40 3.41 101.5 -1.83 -0.46 16.7 88 5 2 8 1 3 1 0  NAG 1 I NAG 2 I
26 3.00 3.00 104.4 -1.90 -0.48 15.8 90 7 3 11 2 3 1 0  NAG 1 I NAG 2 I
27 2.26 2.25 109.6 -1.66 -0.82 9.8 102 3 3 14 0 0 0 0  NAG 2 H MAN 3 H MAN 4 H MAN 6 H
28 2.26 2.26 116.0 -2.08 -0.71 15.6 98 10 4 24 0 0 0 0  PG4 3005 F NAG 2 H MAN 3 H MAN 4 H MAN 6 H
29 2.25 2.26 116.6 -1.72 -0.58 12.6 93 8 3 13 2 3 2 0  PG4 3001 E NAG 1 H NAG 2 H MAN 3 H MAN 4 H MAN 5
H NAG 1 N
30 2.75 4.34 142.9 -1.64 -0.75 14.2 98 10 6 18 0 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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