PDBsum entry 2f8x Go to PDB code:  Tunnel analysis for: 2f8x calculated with MOLE 2.0 PDB id 2f8x Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.22 1.29 34.8 -0.65 -0.29 8.6 72 4 0 1 2 4 2 1  DT 7 X 2 1.22 1.29 39.8 -0.90 -0.29 10.9 68 5 0 1 2 2 3 1  DG 8 X DG 9 X DG 10 X DA 11 X 3 1.23 1.30 41.7 -0.54 -0.35 9.5 72 4 1 2 2 3 2 1  DG 8 X DG 9 X DA 113 Y 4 1.22 1.29 60.5 -0.87 -0.33 12.6 73 7 0 3 4 2 3 1  DG 8 X DG 9 X DA 16 X DT 105 Y DT 106 Y 5 1.23 1.26 66.0 -1.21 -0.46 13.3 74 6 0 4 3 2 3 1  DG 8 X DG 9 X DA 16 X DA 17 X DC 104 Y DT 105 Y DT 106 Y Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.