PDBsum entry 2dyp Go to PDB code:  Pore analysis for: 2dyp calculated with MOLE 2.0 PDB id 2dyp Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.48 1.48 27.7 -0.88 -0.46 18.4 86 3 6 2 4 1 1 0   2 1.10 2.00 29.9 0.40 0.20 9.1 72 1 4 0 6 4 1 0   3 2.28 2.67 56.8 -1.22 -0.52 22.5 85 4 6 4 6 0 0 0   4 1.64 2.34 60.8 -0.78 -0.46 17.7 89 3 4 5 7 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.