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PDBsum entry 2dtu
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Tunnel analysis for: 2dtu calculated with  MOLE 2.0
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PDB id
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2dtu
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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7 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.15 |
1.30 |
157.2 |
-0.79 |
-0.13 |
16.3 |
83 |
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8 |
10 |
10 |
12 |
9 |
0 |
0 |
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DG 2 G 3DR 3 G DC 4 G DT 111 H DG 114 H DA 115 H
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2 |
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1.13 |
1.24 |
31.6 |
0.65 |
0.25 |
11.5 |
84 |
1 |
1 |
1 |
6 |
1 |
0 |
0 |
DC 1 K DG 2 K
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3 |
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1.11 |
1.22 |
34.7 |
-0.61 |
-0.07 |
16.7 |
86 |
3 |
2 |
4 |
6 |
1 |
0 |
0 |
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4 |
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1.22 |
1.25 |
16.4 |
0.25 |
0.11 |
17.5 |
80 |
2 |
1 |
1 |
4 |
1 |
0 |
0 |
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5 |
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1.20 |
2.17 |
15.7 |
0.87 |
0.41 |
10.6 |
83 |
2 |
2 |
0 |
6 |
2 |
0 |
0 |
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6 |
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1.62 |
1.63 |
15.1 |
-2.04 |
-0.32 |
11.8 |
85 |
1 |
1 |
1 |
1 |
1 |
0 |
0 |
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7 |
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1.20 |
1.78 |
21.1 |
-2.84 |
-0.73 |
37.0 |
85 |
3 |
3 |
0 |
1 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program