PDBsum entry 2d3c Go to PDB code:  Pore analysis for: 2d3c calculated with MOLE 2.0 PDB id 2d3c Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   22 pores, coloured by radius 15 pores, coloured by radius 15 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.75 1.75 25.9 -1.84 -0.45 12.8 79 2 3 3 1 2 2 0   2 1.81 1.82 38.4 -0.80 -0.26 15.9 71 2 4 1 2 4 4 0   3 1.86 1.86 41.3 -1.00 -0.31 15.5 75 2 4 2 2 4 4 0   4 1.84 1.84 42.6 -1.02 -0.33 15.6 73 2 4 1 2 4 4 0   5 3.18 3.83 53.6 1.27 0.30 7.0 89 0 5 1 10 0 0 5   6 1.83 1.82 56.0 0.65 0.27 11.7 83 1 2 3 11 3 3 0   7 1.87 1.86 59.0 0.52 0.25 11.8 85 1 2 4 11 3 3 0   8 1.86 1.83 60.2 0.34 0.16 11.7 84 1 2 3 11 3 3 0   9 1.82 1.82 62.9 -0.33 -0.27 12.8 81 1 7 3 6 1 1 5   10 1.83 1.83 63.1 -0.36 -0.31 12.3 81 1 7 3 6 1 1 5   11 1.84 1.84 63.1 -0.31 -0.26 12.9 81 1 7 3 6 1 1 5   12 1.88 1.86 63.7 -0.12 -0.23 11.4 81 1 7 3 6 1 1 5   13 1.83 1.87 64.1 -1.67 -0.60 19.8 71 2 4 3 4 4 4 0   14 1.83 1.84 67.8 -1.71 -0.59 19.4 72 2 4 3 4 4 4 0   15 1.79 1.73 71.6 0.12 0.06 12.7 85 1 4 4 12 3 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.