PDBsum entry 2c6h

Pore analysis for: 2c6h calculated with

MOLE 2.0

PDB id

2c6h

Pores calculated on whole structure

Pores calculated excluding ligands

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MOLEonline 2.0 manipulation
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visualization
with HETATM:

without HETATM:

0 pores, coloured by radius

6 pores, coloured by radius

6 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.14

1.15

45.1

0.34

-0.04

9.0

78

2

1

0

8

1

2

1

HEM 1407 A PXI 1408 A

2

1.34

1.48

57.8

-0.38

-0.19

13.4

82

3

5

0

10

2

4

0

HEM 1407 A PXI 1408 A

3

1.30

1.69

85.0

-0.18

-0.02

14.6

76

3

9

0

15

5

4

1

HEM 1407 A PXI 1408 A

4

1.13

1.15

42.5

0.36

-0.04

9.3

79

2

1

0

8

1

1

1

HEM 1408 B PXI 1409 B

5

1.36

1.34

44.1

-0.32

-0.19

14.1

84

3

5

0

7

2

1

0

HEM 1408 B PXI 1409 B

6

1.15

1.17

51.5

0.34

-0.04

9.6

76

1

4

0

10

4

2

1

HEM 1408 B PXI 1409 B

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.