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PDBsum entry 2c6h

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Tunnel analysis for: 2c6h calculated with MOLE 2.0 PDB id
2c6h
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.37 1.47 43.2 -0.06 -0.18 10.1 80 4 1 0 8 2 2 1  HEM 1408 B PXI 1409 B
2 1.44 1.66 48.1 -0.51 -0.22 14.5 78 3 5 1 9 4 3 1  HEM 1408 B PXI 1409 B
3 1.30 1.67 54.3 0.45 0.04 8.9 72 3 3 0 12 3 2 1  HEM 1408 B
4 1.34 1.36 15.7 -2.10 0.19 23.3 72 2 2 0 1 3 1 0  
5 1.18 1.79 19.7 -2.53 -0.61 28.9 84 4 2 1 0 0 1 0  SO4 1431 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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