PDBsum entry 2c2d Go to PDB code:  Pore analysis for: 2c2d calculated with MOLE 2.0 PDB id 2c2d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.86 1.86 30.2 -0.42 -0.11 16.7 83 4 1 0 5 0 0 0  DTP 1001 A DG 9 P DA 10 P DT 11 P DT 12 P DC 13 P DC 4 T 8OG 5 T DG 6 T DA 7 T DC 14 T 2 1.87 1.86 40.7 -1.32 -0.24 14.4 76 5 3 1 3 4 1 0  DTP 1001 A DTP 1002 A DG 5 P DC 13 P DG 6 T DA 7 T DA 8 T DT 9 T DC 10 T DC 11 T DT 12 T 3 1.89 2.01 44.8 -1.80 -0.41 18.1 73 5 4 2 1 4 1 0  DTP 1002 A DG 5 P DC 13 P DA 7 T DA 8 T DT 9 T DC 10 T DC 11 T DT 12 T 4 3.01 3.02 56.9 -1.23 -0.35 12.4 81 7 3 2 4 4 0 0  DTP 1001 A DTP 1002 A CA 2004 A CA 2005 A DG 5 P DG 9 P DA 10 P DT 11 P DT 12 P DC 13 P DC 4 T DA 7 T DA 8 T DT 9 T DC 10 T DC 11 T DT 12 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.