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PDBsum entry 2c2d
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Tunnel analysis for: 2c2d calculated with  MOLE 2.0
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PDB id
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2c2d
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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3 tunnels,
coloured by tunnel radius |
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3 tunnels,
coloured by
tunnel radius
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3 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.58 |
2.46 |
25.4 |
-1.60 |
-0.02 |
31.7 |
94 |
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4 |
0 |
2 |
2 |
0 |
0 |
0 |
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DG 5 P DT 9 T DC 10 T DC 11 T DT 12 T
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2 |
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1.65 |
2.30 |
26.1 |
1.85 |
0.68 |
8.8 |
90 |
2 |
0 |
0 |
6 |
0 |
0 |
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DT 11 P DT 12 P DC 4 T DG 6 T DA 7 T DA 8 T
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3 |
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1.66 |
2.29 |
45.6 |
0.26 |
0.21 |
16.1 |
87 |
5 |
1 |
0 |
9 |
0 |
0 |
0 |
DTP 1001 A DT 11 P DC 4 T 8OG 5 T DG 6 T DA 7 T D
A 8 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program