PDBsum entry 2asd Go to PDB code:  Tunnel analysis for: 2asd calculated with MOLE 2.0 PDB id 2asd Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.59 1.60 26.0 -0.81 0.04 24.3 92 4 0 1 3 0 0 0  DT 804 D DG 805 D DT 808 D DT 908 E DA 909 E DC 910 E DC 911 E DA 912 E 2 1.59 1.59 27.6 0.90 0.44 11.9 90 3 0 1 6 0 0 0  DT 811 D DA 904 E DC 905 E DC 907 E DT 908 E 3 1.59 1.59 37.6 0.44 0.06 13.0 92 3 1 0 4 0 0 0  DT 808 D DG 809 D DG 810 D DT 811 D DC 907 E DT 908 E 4 1.19 1.19 39.6 0.32 0.18 15.1 93 3 0 1 7 0 0 0  DA 904 E DC 905 E 8OG 906 E DC 907 E DT 908 E Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.