PDBsum entry 2amq Go to PDB code:  Pore analysis for: 2amq calculated with MOLE 2.0 PDB id 2amq Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.14 4.38 32.4 -1.99 -0.58 29.9 91 6 6 3 2 0 0 0   2 2.17 2.17 37.9 -1.69 -0.64 23.6 86 5 5 3 2 0 0 0   3 2.63 2.62 43.2 -2.26 -0.67 27.4 90 7 4 4 1 0 0 0   4 2.17 2.17 48.8 -1.81 -0.74 20.9 85 6 4 4 1 0 0 0   5 1.43 1.91 41.0 -1.76 -0.20 15.6 77 3 2 3 0 4 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.