PDBsum entry 2agp Go to PDB code:  Pore analysis for: 2agp calculated with MOLE 2.0 PDB id 2agp Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.18 2.18 28.5 -1.47 -0.39 22.3 84 5 2 3 2 1 0 0  DGT 401 A MG 403 A DT 1812 C DOC 1813 C DG 1906 D DA 1908 D 2 2.05 2.05 33.2 1.12 0.44 8.7 94 2 0 2 5 0 0 0  DG 1805 C DA 1806 C DA 1807 C DG 1808 C DG 1809 C DT 1811 C DT 1903 D DT 1904 D DT 1905 D DG 1906 D DA 1907 D DA 1908 D DT 1909 D DC 1910 D 3 2.07 2.08 44.4 -0.17 0.10 16.0 92 4 0 3 5 0 0 0  DG 1804 C DG 1805 C DA 1807 C DG 1808 C DG 1809 C DT 1811 C DT 1903 D DT 1904 D DT 1905 D DG 1906 D DA 1907 D DA 1908 D DT 1909 D DC 1910 D DC 1911 D 4 1.48 1.55 45.3 -2.26 -0.62 27.6 87 6 2 3 1 0 0 0  MG 404 B MG 408 B DGT 501 B DG 1805 E DA 1806 E D A 1807 E DT 1812 E DOC 1813 E DT 1909 F DC 1910 F DC 1911 F 5 1.47 1.55 49.0 -2.44 -0.54 28.4 83 6 2 3 1 1 0 0  DG 1805 E DA 1806 E DA 1807 E DA 1908 F DT 1909 F DC 1910 F DC 1911 F 6 2.81 2.81 49.4 -0.67 -0.30 12.3 86 3 3 1 2 0 0 0  MG 404 B DGT 501 B DA 1807 E DG 1808 E DG 1809 E DA 1810 E DT 1811 E DT 1812 E DOC 1813 E DT 1904 F DT 1905 F DT 1912 F DT 1913 F DC 1914 F DC 1915 F 7 1.82 1.82 72.6 -0.51 -0.04 20.2 89 6 1 1 4 0 0 0  DG 1805 E DA 1806 E DA 1807 E DG 1808 E DG 1809 E DA 1810 E DT 1811 E DT 1812 E DT 1904 F DG 1906 F DA 1907 F DA 1908 F DT 1909 F DC 1910 F DC 1911 F DT 1912 F DT 1913 F DC 1914 F DC 1915 F 8 1.39 1.39 102.2 -1.85 -0.56 19.4 79 6 7 4 3 1 0 0  DG 1802 C DG 1808 C DG 1809 C DA 1810 C DT 1811 C DT 1903 D DT 1904 D DT 1913 D DC 1914 D DC 1915 D DC 1916 D 9 1.36 1.36 125.7 -1.72 -0.58 16.8 74 11 6 3 1 3 0 0  DG 1802 C DG 1805 C DG 1808 C DG 1809 C DA 1810 C DT 1811 C DT 1812 C DC 1910 D DC 1911 D DT 1912 D DT 1913 D DC 1914 D DC 1915 D DC 1916 D 10 1.40 1.47 154.1 -1.70 -0.53 19.5 82 17 6 7 4 2 0 0  MG 404 B MG 408 B DGT 501 B DG 1802 C DG 1808 C DG 1809 C DA 1810 C DT 1811 C DT 1812 C DA 1908 D DT 1909 D DC 1910 D DC 1911 D DT 1912 D DT 1913 D DC 1914 D DC 1915 D DC 1916 D DT 1812 E DOC 1813 E DT 1905 F DG 1906 F DA 1908 F Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.