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PDBsum entry 1xsp

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Pore analysis for: 1xsp calculated with MOLE 2.0 PDB id
1xsp
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.37 1.53 30.6 -1.45 -0.41 21.2 87 4 4 1 4 1 0 0  NA 576 A PPV 579 A DG 7 P
2 2.89 2.93 37.8 -1.97 -0.43 25.6 83 6 1 1 2 1 0 0  PPV 579 A DA 2 P DG 3 P DT 4 P DA 5 P DC 6 P DG 7
P DG 3 T DC 4 T DT 7 T
3 1.23 1.26 40.0 -0.18 -0.03 10.7 79 2 2 2 5 2 1 0  DG 3 P DT 4 P DA 5 P DC 6 P DA 8 T DC 9 T DT 10 T
DG 11 T

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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