PDBsum entry 1xsp Go to PDB code:  Tunnel analysis for: 1xsp calculated with MOLE 2.0 PDB id 1xsp Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.16 1.42 26.7 -0.67 -0.57 8.6 84 2 0 3 3 1 0 0  DA 2 P DG 3 P DT 4 P DA 5 P 2 1.13 1.42 36.3 -1.57 -0.50 21.4 89 6 1 3 4 0 0 0  PPV 579 A DA 5 P DC 6 P DG 7 P 3 1.13 1.42 49.2 -1.63 -0.50 19.1 86 6 1 5 5 1 1 0  PPV 579 A DA 5 P DC 6 P DG 7 P 4 1.49 1.65 21.2 -0.51 0.08 14.8 75 2 3 2 3 2 1 0  DC 6 P DA 8 T 5 1.69 1.69 21.5 -0.08 -0.35 4.9 84 1 0 1 3 0 0 0  DG 3 P DT 4 P DA 5 P DC 6 P DA 8 T DC 9 T DT 10 T DG 11 T 6 1.47 2.06 22.5 -0.41 0.11 14.3 75 2 3 2 3 2 1 0  DC 6 P DA 8 T 7 1.24 1.29 29.7 0.53 0.10 7.3 79 1 1 1 4 2 0 0  DG 3 P DT 4 P DA 5 P DC 6 P DA 8 T DC 9 T DT 10 T DG 11 T 8 1.24 1.27 30.7 0.41 0.03 7.3 79 1 1 1 4 2 0 0  DG 3 P DT 4 P DA 5 P DC 6 P DA 8 T DC 9 T DT 10 T DG 11 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.