PDBsum entry 1x88 Go to PDB code:  Pore analysis for: 1x88 calculated with MOLE 2.0 PDB id 1x88 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 pore, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.54 1.81 35.0 -1.29 -0.57 18.4 84 3 2 2 2 2 0 0  ADP 602 B MG 702 B NAT 802 B 2 1.32 1.47 56.9 -1.26 -0.17 15.8 76 4 1 2 3 3 2 0  ADP 601 A NAT 801 A 3 1.34 1.78 109.7 -1.80 -0.49 19.8 86 10 5 7 5 2 1 0  ADP 601 A MG 701 A 4 1.32 1.76 119.2 -1.12 -0.35 15.0 82 10 5 8 7 6 1 0  ADP 601 A MG 701 A 5 1.32 1.77 130.8 -1.83 -0.44 19.8 87 12 6 8 7 3 1 0  ADP 601 A MG 701 A NAT 801 A 6 1.89 1.90 158.5 -1.43 -0.36 18.0 84 14 9 11 9 6 1 0  ADP 601 A MG 701 A NAT 801 A 7 1.35 1.37 163.2 -1.94 -0.47 22.1 85 16 8 13 8 4 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.