PDBsum entry 1vw3 Go to PDB code:  Pore analysis for: 1vw3 calculated with MOLE 2.0 PDB id 1vw3 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   32 pores, coloured by radius 32 pores, coloured by radius 32 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.81 2.81 43.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  C 728 A C 729 A U 730 A U 731 A U 732 A A 733 A U 741 A U 780 A G 781 A G 782 A A 789 A A 790 A A 829 A C 840 A G 841 A U 847 A U 848 A A 858 A U 859 A A 860 A A 861 A U 862 A U 1187 A G 1227 A A 1228 A A 2295 A A 2296 A A 2449 A A 2584 A A 2585 A G 2596 A G 2597 A U 2598 A C 2622 A A 2623 A A 2624 A 2 3.60 3.60 61.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  A 714 A U 715 A A 716 A A 720 A U 780 A G 781 A G 782 A A 789 A A 790 A A 829 A C 840 A G 841 A A 890 A A 891 A C 1964 A C 1965 A A 2274 A U 2275 A G 2276 A U 2285 A U 2286 A A 2287 A U 2288 A C 2289 A A 2296 A G 2297 A U 2298 A A 2299 A U 2300 A C 2301 A A 2449 A A 2584 A A 2585 A G 2596 A G 2597 A U 2598 A C 2622 A A 2623 A A 2624 A A 2653 A U 2654 A A 2714 A A 2763 A 3 3.01 3.01 71.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  A 790 A A 2316 A U 2372 A U 2373 A A 2425 A U 2427 A A 2428 A G 2429 A U 2431 A A 2432 A A 2433 A A 2434 A A 2435 A A 2436 A U 2446 A A 2447 A A 2448 A A 2449 A C 2463 A A 2464 A A 2465 A U 2466 A A 2467 A A 2583 A A 2584 A A 2585 A U 2586 A U 2606 A G 2607 A C 2608 A 4 2.93 2.93 79.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  U 519 A A 520 A A 552 A U 553 A A 739 A U 780 A G 781 A G 782 A A 789 A A 790 A A 829 A C 840 A G 841 A U 848 A U 849 A A 850 A A 861 A U 862 A A 863 A U 1772 A A 2295 A A 2296 A A 2449 A A 2584 A A 2585 A G 2596 A G 2597 A U 2598 A A 2618 A A 2619 A C 2620 A A 2621 A C 2622 A A 2623 A A 2624 A C 2626 A G 2627 A A 2628 A A 2660 A C 2661 A A 2663 A A 2664 A U 2665 A A 2666 A A 2667 A C 2668 A A 2679 A A 2680 A G 2681 A G 2682 A U 2683 A U 2684 A U 2686 A MG 3378 A 5 2.58 2.58 94.1 -0.50 -0.74 5.8 85 1 0 0 1 0 0 0  A 155 A A 156 A A 157 A C 592 A G 593 A U 595 A G 662 A U 663 A U 664 A G 1341 A U 1342 A A 1367 A U 1368 A U 1369 A A 1370 A A 1381 A A 1382 A U 1383 A A 1390 A U 1391 A A 1392 A U 1393 A U 1394 A A 1724 A A 2093 A U 2095 A C 2096 A U 2097 A U 2098 A A 2099 A U 2100 A A 2239 A U 2243 A A 2244 A MG 3324 A MG 3360 A 6 2.62 2.62 94.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  U 319 A U 320 A A 321 A U 322 A A 337 A G 338 A A 339 A A 344 A G 345 A G 346 A A 352 A A 353 A A 354 A U 1764 A A 1765 A A 1766 A A 1767 A A 1771 A U 1772 A A 1779 A U 1780 A A 1781 A A 1782 A U 1783 A A 2664 A U 2665 A A 2666 A A 2667 A C 2668 A A 2679 A A 2680 A G 2681 A G 2682 A 7 2.91 2.91 100.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  C 1963 A C 1964 A C 1965 A G 2276 A A 2719 A U 2728 A A 2729 A G 2730 A C 2731 A G 2732 A U 2743 A U 2745 A U 2746 A G 2747 A U 2758 A U 2759 A U 2772 A C 2773 A C 2786 A U 2804 A A 2805 A A 2806 A G 2820 A U 2821 A U 2822 A C 2823 A G 2824 A A 2834 A U 2835 A G 2836 A C 2840 A U 2851 A U 2852 A A 2869 A 8 2.64 2.64 102.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  U 283 A G 290 A A 492 A A 493 A U 494 A A 495 A U 496 A U 497 A A 517 A A 518 A U 519 A A 520 A U 554 A A 564 A A 565 A U 732 A A 733 A U 734 A A 863 A A 864 A A 865 A U 1187 A G 1227 A A 1228 A A 1771 A U 1772 A C 2626 A G 2627 A A 2628 A A 2660 A C 2661 A A 2663 A A 2664 A U 2665 A A 2666 A A 2667 A C 2668 A A 2679 A A 2680 A G 2681 A G 2682 A U 2683 A U 2684 A U 2686 A 9 3.14 3.14 104.0 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  A 712 A U 713 A G 727 A C 728 A U 780 A G 781 A G 782 A A 789 A A 790 A A 829 A C 840 A G 841 A U 847 A U 848 A A 873 A U 874 A U 875 A A 876 A U 877 A U 879 A A 886 A G 887 A U 889 A A 890 A A 891 A A 892 A U 893 A A 894 A A 895 A A 952 A U 953 A A 954 A A 1091 A G 1092 A A 1093 A U 1094 A A 1095 A A 1100 A C 1101 A A 2295 A A 2296 A A 2449 A A 2584 A A 2585 A G 2596 A G 2597 A U 2598 A C 2622 A A 2623 A A 2624 A U 2723 A A 2724 A C 2731 A G 2732 A A 2754 A U 2755 A U 2783 A U 2784 A A 2806 A G 2807 A 10 1.79 1.79 120.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 229 A A 230 A A 231 A G 334 A U 335 A G 587 A C 588 A A 589 A A 1381 A U 1383 A A 1384 A U 1385 A A 1386 A A 1715 A U 1716 A C 1965 A U 1966 A G 1969 A C 1970 A A 1971 A G 1972 A G 1980 A U 1981 A A 1982 A A 2093 A U 2095 A C 2096 A U 2097 A A 2239 A U 2243 A A 2244 A U 2255 A C 2256 A U 2257 A A 2267 A G 2268 A U 2269 A U 2270 A U 2271 A U 2272 A G 2273 A U 2275 A G 2276 A U 2703 A U 2704 A A 2869 A 11 2.53 2.53 121.0 -0.36 -0.77 3.4 93 0 0 0 1 0 0 0  A 156 A A 157 A A 391 A C 392 A C 393 A G 394 A A 396 A U 637 A U 638 A A 642 A U 643 A G 1341 A U 1342 A A 1566 A C 1567 A A 1959 A A 1960 A G 1961 A A 1962 A C 1963 A C 1964 A C 1965 A G 2276 A A 2719 A U 2772 A U 2851 A U 2852 A A 2853 A A 2869 A U 2876 A U 2877 A 12 2.39 2.39 122.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  U 1772 A A 2316 A U 2372 A U 2373 A A 2425 A U 2427 A A 2428 A G 2429 A A 2436 A U 2437 A A 2438 A U 2439 A G 2440 A U 2441 A A 2602 A C 2603 A U 2604 A U 2606 A G 2607 A C 2608 A G 2609 A U 2615 A G 2616 A A 2618 A G 2629 A U 2630 A G 2631 A A 2632 A A 2648 A U 2649 A G 2650 A G 2651 A C 2652 A A 2653 A A 2660 A C 2661 A A 2663 A A 2664 A U 2665 A A 2666 A A 2667 A C 2668 A A 2679 A A 2680 A G 2681 A G 2682 A U 2683 A U 2684 A A 2685 A U 2686 A MG 3391 A 13 2.51 2.51 122.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  U 283 A A 284 A U 285 A U 286 A G 287 A U 289 A G 290 A U 319 A U 320 A A 321 A G 325 A A 329 A A 330 A A 344 A G 345 A G 346 A U 348 A A 349 A A 350 A C 351 A A 352 A A 353 A A 354 A A 492 A A 493 A A 518 A U 519 A A 520 A U 553 A A 739 A U 780 A G 781 A G 782 A A 789 A A 790 A A 829 A C 840 A G 841 A U 848 A U 849 A A 850 A A 861 A U 862 A A 863 A A 864 A A 865 A A 1779 A U 1780 A A 1781 A A 2295 A A 2296 A A 2449 A A 2584 A A 2585 A G 2596 A G 2597 A U 2598 A C 2620 A A 2621 A C 2622 A A 2623 A A 2624 A C 2626 A G 2627 A A 2679 A A 2680 A G 2681 A G 2682 A U 2683 A 14 1.87 1.88 123.9 -0.69 -0.66 7.3 76 2 2 2 2 3 0 0  A 278 A U 279 A G 282 A U 283 A U 491 A A 492 A A 493 A A 503 A A 504 A C 505 A A 506 A A 507 A G 511 A U 512 A U 513 A A 514 A A 518 A U 519 A U 553 A A 568 A A 739 A U 780 A G 781 A G 782 A A 789 A A 790 A A 829 A C 840 A G 841 A U 848 A U 849 A A 850 A A 861 A U 862 A A 863 A A 864 A A 865 A A 2295 A A 2296 A A 2449 A A 2584 A A 2585 A G 2596 A G 2597 A U 2598 A C 2620 A A 2621 A C 2622 A A 2623 A A 2624 A C 2626 A G 2627 A 15 1.92 1.92 128.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  U 468 A A 871 A A 873 A U 874 A U 875 A A 876 A G 887 A U 889 A A 890 A A 905 A C 908 A G 910 A C 911 A A 928 A A 942 A A 943 A A 950 A A 951 A A 952 A U 953 A A 962 A A 963 A A 964 A A 1064 A C 1068 A G 1085 A U 1086 A U 1087 A A 1088 A A 1122 A U 1123 A G 1929 A A 1931 A C 1964 A C 1965 A U 2275 A G 2276 A A 2714 A A 2763 A C 2764 A A 2869 A MG 3358 A 16 2.48 2.48 128.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  A 712 A U 713 A G 727 A C 728 A U 780 A G 781 A G 782 A A 789 A A 790 A A 829 A C 840 A G 841 A U 847 A U 848 A A 873 A U 874 A U 875 A A 876 A U 877 A U 879 A A 886 A G 887 A U 889 A A 890 A A 891 A A 892 A U 893 A A 894 A A 895 A C 911 A A 928 A A 942 A A 943 A A 950 A A 951 A A 952 A U 953 A A 962 A A 963 A A 964 A A 1064 A C 1068 A G 1085 A U 1086 A U 1087 A A 1088 A A 1122 A U 1123 A A 2295 A A 2296 A A 2449 A A 2584 A A 2585 A G 2596 A G 2597 A U 2598 A C 2622 A A 2623 A A 2624 A 17 2.50 2.50 134.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  U 283 A A 284 A U 285 A U 286 A G 287 A U 289 A G 290 A U 319 A U 320 A A 321 A G 325 A A 329 A A 330 A A 344 A G 345 A G 346 A U 348 A A 349 A A 350 A C 351 A A 352 A A 353 A A 354 A A 492 A A 493 A U 494 A A 495 A U 496 A U 497 A A 518 A U 519 A A 520 A U 554 A A 564 A A 565 A U 732 A A 733 A U 734 A A 863 A A 864 A A 865 A U 1187 A G 1227 A A 1228 A A 1779 A U 1780 A A 1781 A C 2626 A G 2627 A A 2680 A G 2681 A G 2682 A U 2683 A 18 1.92 1.92 141.1 -0.64 -0.68 6.6 76 2 2 2 2 3 0 0  A 278 A U 279 A G 282 A U 283 A G 290 A U 491 A A 492 A A 493 A A 503 A A 504 A C 505 A A 506 A A 507 A G 511 A U 512 A U 513 A A 514 A A 518 A U 519 A A 520 A A 568 A A 1771 A U 1772 A C 2626 A G 2627 A A 2628 A A 2660 A C 2661 A A 2663 A A 2664 A U 2665 A A 2666 A A 2667 A C 2668 A A 2679 A A 2680 A G 2681 A G 2682 A U 2683 A U 2684 A U 2686 A 19 3.33 3.33 140.4 -0.46 -0.80 4.0 89 0 1 1 0 0 1 0  G 111 A U 148 A A 149 A A 156 A A 157 A A 220 A A 221 A A 222 A C 223 A A 247 A U 277 A G 282 A U 283 A G 290 A A 291 A C 370 A G 389 A A 396 A A 397 A G 398 A G 399 A A 489 A U 490 A U 491 A A 492 A A 493 A A 518 A U 519 A A 520 A U 553 A A 574 A A 575 A U 576 A U 577 A G 689 A C 690 A A 739 A U 780 A G 781 A G 782 A A 789 A A 790 A A 829 A C 840 A G 841 A U 848 A U 849 A A 850 A A 861 A U 862 A A 863 A A 864 A A 865 A G 1341 A U 1342 A A 2295 A A 2296 A A 2449 A A 2584 A A 2585 A G 2596 A G 2597 A U 2598 A C 2620 A A 2621 A C 2622 A A 2623 A A 2624 A C 2626 A G 2627 A 20 2.23 2.23 144.9 -0.44 -0.80 3.9 100 0 1 1 0 0 0 0  G 111 A U 148 A A 149 A A 156 A A 157 A A 220 A A 221 A A 222 A C 223 A A 225 A A 226 A A 244 A G 245 A U 246 A A 247 A A 258 A A 259 A G 260 A A 263 A U 264 A A 275 A U 276 A U 277 A G 294 A U 319 A U 320 A A 326 A A 330 A A 331 A A 332 A A 344 A G 345 A G 346 A A 347 A U 348 A A 350 A C 351 A A 352 A A 353 A A 354 A A 369 A C 370 A G 389 A A 396 A A 397 A G 398 A G 399 A U 577 A G 689 A C 690 A G 1341 A U 1342 A A 1779 A U 1780 A 21 2.26 2.26 146.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  U 228 A G 229 A U 240 A C 241 A U 286 A G 287 A G 323 A U 324 A G 325 A A 328 A A 329 A A 330 A G 334 A U 335 A A 349 A A 1381 A U 1383 A A 1384 A U 1385 A A 1386 A A 1771 A U 1772 A G 1980 A U 1981 A A 1982 A A 2093 A U 2095 A C 2096 A U 2097 A A 2239 A U 2243 A A 2244 A U 2255 A C 2256 A U 2257 A A 2663 A A 2664 A U 2665 A A 2666 A A 2667 A C 2668 A A 2679 A A 2680 A G 2681 A G 2682 A 22 2.82 2.82 147.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  U 228 A G 229 A A 318 A U 319 A U 320 A A 321 A U 322 A G 323 A U 324 A G 325 A G 334 A U 335 A A 337 A G 338 A A 339 A A 344 A G 345 A G 346 A A 352 A A 353 A A 354 A A 1381 A U 1383 A A 1384 A U 1385 A A 1386 A A 1762 A A 1763 A U 1764 A A 1765 A A 1766 A A 1767 A A 1779 A U 1780 A A 1781 A A 1782 A U 1783 A G 1980 A U 1981 A A 1982 A A 2093 A U 2095 A C 2096 A U 2097 A A 2239 A U 2243 A A 2244 A U 2255 A C 2256 A U 2257 A U 2259 A A 2260 A 23 2.93 2.93 154.1 -0.46 -0.80 4.0 89 0 1 1 0 0 1 0  G 111 A U 148 A A 149 A A 156 A A 157 A A 220 A A 221 A A 222 A C 223 A A 247 A U 277 A G 282 A U 283 A G 290 A A 291 A C 370 A G 389 A A 396 A A 397 A G 398 A G 399 A A 489 A U 490 A U 491 A A 492 A A 493 A A 520 A A 574 A A 575 A U 576 A U 577 A G 689 A C 690 A G 1341 A U 1342 A A 1771 A U 1772 A C 2626 A G 2627 A A 2628 A A 2660 A C 2661 A A 2663 A A 2664 A U 2665 A A 2666 A A 2667 A C 2668 A A 2679 A A 2680 A G 2681 A G 2682 A U 2683 A U 2684 A U 2686 A 24 2.19 2.19 159.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  U 286 A G 287 A G 288 A U 289 A U 319 A U 320 A A 321 A G 325 A A 329 A A 330 A A 344 A G 345 A G 346 A U 348 A A 349 A A 350 A C 351 A A 352 A A 353 A A 354 A A 1779 A U 1780 A A 1781 A C 1965 A U 2272 A G 2276 A G 2281 A U 2282 A A 2662 A A 2663 A A 2680 A G 2688 A A 2689 A U 2690 A A 2692 A A 2698 A A 2699 A A 2700 A A 2701 A G 2702 A U 2703 A U 2861 A G 2862 A G 2864 A U 2867 A A 2869 A 25 2.35 2.35 168.3 -0.78 -0.70 9.1 87 4 2 3 1 1 0 0  U 475 A G 476 A U 1296 A G 1297 A U 1917 A G 1918 A A 1921 A U 1922 A A 1942 A C 1943 A C 1944 A U 1945 A U 1946 A A 1954 A C 1955 A G 1956 A G 1957 A A 1958 A A 1960 A G 1961 A C 1963 A C 1964 A C 1965 A G 2276 A A 2719 A U 2766 A U 2772 A A 2839 A U 2851 A U 2852 A A 2869 A U 2882 A C 2883 A U 2884 A G 2885 A A 2889 A A 2890 A G 2891 A C 2902 A A 3112 A U 3113 A U 3136 A A 3142 A A 3143 A A 3144 A A 3145 A A 3155 A U 3156 A A 3243 A A 3244 A A 3245 A 26 1.93 1.93 167.8 -0.71 -0.70 7.5 78 2 3 2 2 3 1 0  A 225 A A 226 A A 244 A G 245 A U 246 A A 258 A A 259 A G 260 A A 263 A U 264 A A 275 A U 276 A U 277 A A 278 A G 294 A U 319 A U 320 A A 326 A A 330 A A 331 A A 332 A A 344 A G 345 A G 346 A A 347 A U 348 A A 350 A C 351 A A 352 A A 353 A A 354 A A 369 A C 370 A A 489 A U 490 A U 491 A A 503 A A 504 A C 505 A A 506 A A 507 A A 568 A U 577 A A 1779 A U 1780 A 27 3.15 3.15 167.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  A 225 A A 226 A G 227 A A 244 A G 245 A U 246 A A 258 A A 259 A U 276 A U 277 A G 282 A U 283 A G 290 A A 291 A G 294 A A 326 A A 330 A A 331 A A 332 A U 333 A G 334 A U 335 A A 489 A U 490 A U 491 A A 492 A A 493 A A 518 A U 519 A A 520 A U 553 A A 574 A A 575 A U 576 A U 577 A A 739 A U 780 A G 781 A G 782 A A 789 A A 790 A A 829 A C 840 A G 841 A U 848 A U 849 A A 850 A A 861 A U 862 A A 863 A A 864 A A 865 A A 1381 A U 1383 A A 1384 A U 1385 A A 1386 A A 2093 A U 2095 A C 2096 A U 2097 A A 2239 A U 2243 A A 2244 A U 2255 A C 2256 A A 2295 A A 2296 A A 2449 A A 2584 A A 2585 A G 2596 A G 2597 A U 2598 A C 2620 A A 2621 A C 2622 A A 2623 A A 2624 A C 2626 A G 2627 A 28 2.72 2.72 176.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  A 225 A A 226 A G 227 A A 244 A G 245 A U 246 A A 258 A A 259 A U 276 A U 277 A G 282 A U 283 A G 290 A A 291 A G 294 A A 326 A A 330 A A 331 A A 332 A U 333 A G 334 A U 335 A A 489 A U 490 A U 491 A A 492 A A 493 A U 494 A A 495 A U 496 A U 497 A A 517 A A 518 A U 519 A A 520 A U 554 A A 564 A A 565 A A 574 A A 575 A U 576 A U 577 A U 732 A A 733 A U 734 A A 863 A A 864 A A 865 A U 1187 A G 1227 A A 1228 A A 1381 A U 1383 A A 1384 A U 1385 A A 1386 A A 2093 A U 2095 A C 2096 A U 2097 A A 2239 A U 2243 A A 2244 A U 2255 A C 2256 A C 2626 A G 2627 A 29 1.90 1.90 180.7 -0.77 -0.68 8.1 78 2 3 2 2 3 1 0  A 225 A A 226 A G 227 A A 244 A G 245 A U 246 A A 258 A A 259 A U 276 A U 277 A A 278 A G 294 A A 326 A A 330 A A 331 A A 332 A U 333 A G 334 A U 335 A A 369 A C 370 A A 489 A U 490 A U 491 A A 503 A A 504 A C 505 A A 506 A A 507 A A 568 A U 577 A A 1381 A U 1383 A A 1384 A U 1385 A A 1386 A A 2093 A U 2095 A C 2096 A U 2097 A A 2239 A U 2243 A A 2244 A U 2255 A C 2256 A 30 2.61 2.61 192.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  U 637 A U 638 A A 642 A U 643 A A 1319 A C 1320 A C 1321 A U 1322 A U 1323 A U 1324 A A 1345 A A 1346 A G 1561 A A 1566 A C 1567 A U 1568 A A 1579 A G 1580 A A 1592 A A 1593 A G 1594 A G 1595 A U 1596 A A 1599 A G 1910 A U 1911 A G 1912 A A 1913 A A 1914 A A 1915 A A 1958 A A 1959 A A 1960 A G 1961 A A 1962 A C 1963 A C 1964 A C 1965 A G 2276 A A 2719 A U 2772 A U 2851 A U 2852 A A 2853 A A 2869 A U 2876 A U 2877 A U 3015 A U 3017 A A 3018 A U 3019 A U 3027 A A 3028 A 31 3.22 3.22 34.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  U 2201 A U 2202 A A 2203 A A 2204 A G 2205 A U 2206 A A 2207 A A 2208 A U 2209 A A 2210 A U 2211 A A 2232 A U 2233 A U 2234 A U 2236 A A 2237 A U 2238 A A 2239 A U 2240 A 32 3.23 3.23 34.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  A 2183 A C 2184 A U 2201 A U 2202 A A 2203 A A 2204 A G 2205 A U 2206 A A 2207 A A 2208 A U 2209 A A 2210 A U 2211 A A 2232 A U 2233 A U 2234 A U 2236 A A 2237 A U 2238 A A 2239 A U 2240 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.