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PDBsum entry 1vqp

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Top Page protein dna_rna metals Protein-protein interface(s) pores links
Pore analysis for: 1vqp calculated with MOLE 2.0 PDB id
1vqp
Pores calculated on whole structure Pores calculated excluding ligands

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34 pores, coloured by radius 34 pores, coloured by radius 34 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.68 2.68 44.6 -0.87 -0.59 8.4 72 0 3 0 0 1 0 0  C 699 0 U 701 0 G 702 0 G 703 0 C 704 0 G 720 0 A
721 0 G 722 0 G 723 0 G 724 0 C 725 0 C 726 0 G
740 0 C 741 0 G 742 0 G 743 0 G 744 0 U 2387 0 SR
9433 0
2 2.77 2.77 58.8 -0.46 -0.70 7.8 77 1 2 0 2 0 0 0  G 724 0 G 911 0 C 930 0 C 931 0 G 941 0 U 942 0 A
943 0 G 1024 0 C 1026 0 G 1027 0 U 1028 0 U 1030
0 G 1031 0 A 1032 0 C 1033 0 G 1034 0 A 1287 0 U
1288 0 C 1289 0
3 1.39 1.39 82.6 -1.10 -0.76 12.2 87 4 4 2 1 0 0 0  G 304 0 A 305 0 A 306 0 G 307 0 U 308 0 C 309 0 A
319 0 G 320 0 A 321 0 G 322 0 C 330 0 G 332 0 C
338 0 A 340 0 C 341 0 C 343 0 C 344 0 G 345 0
4 2.38 3.52 85.7 -1.65 -0.70 19.9 84 6 7 3 1 0 1 0  G 652 0 C 653 0 U 655 0 G 656 0 G 657 0 A 659 0 G
724 0 C 725 0 C 726 0 G 740 0 C 741 0 G 742 0 G
743 0 G 747 0 C 748 0 C 749 0 G 1036 0 U 2387 0
CD 9205 O
5 2.38 3.47 88.1 -1.67 -0.55 19.2 84 6 4 3 1 1 0 0  G 652 0 C 653 0 U 655 0 G 656 0 G 657 0 A 659 0 U
701 0 G 702 0 G 703 0 C 704 0 G 720 0 A 721 0 G
722 0 G 723 0 G 724 0 G 743 0 G 744 0 G 747 0 C
748 0 C 749 0 G 1036 0 SR 9433 0 CD 9205 O
6 2.70 2.70 104.6 -0.44 -0.64 4.9 66 1 1 0 1 1 0 0  C 699 0 U 701 0 G 702 0 G 703 0 C 704 0 G 720 0 A
721 0 G 722 0 G 723 0 G 724 0 C 725 0 C 741 0 G
742 0 G 743 0 G 744 0 C 910 0 G 911 0 G 928 0 A
929 0 C 930 0 C 931 0 U 932 0 C 933 0 G 1024 0 C
1026 0 G 1027 0 U 1028 0 U 1030 0 G 1031 0 A 1032
0 C 1033 0 G 1034 0 C 1035 0 G 1036 0 G 1037 0 A
1287 0 U 1288 0 C 1289 0 A 2395 0 C 2396 0 SR
9433 0
7 2.38 3.58 132.9 -1.17 -0.69 14.0 84 7 6 4 2 0 0 0  U 651 0 G 652 0 C 653 0 U 655 0 G 656 0 G 657 0 A
659 0 A 686 0 C 741 0 G 742 0 G 743 0 G 747 0 C
748 0 C 749 0 C 910 0 G 911 0 G 928 0 A 929 0 C
930 0 C 931 0 U 932 0 C 933 0 G 1024 0 C 1026 0 G
1027 0 U 1028 0 U 1030 0 G 1031 0 A 1032 0 C 1033
0 G 1034 0 C 1035 0 G 1036 0 G 1037 0 A 1287 0 U
1288 0 C 1289 0 A 2395 0 C 2396 0 CD 9205 O
8 2.16 2.29 160.2 -1.04 -0.78 8.0 92 5 3 9 0 0 1 0  U 2557 0 G 2558 0 A 2569 0 G 2570 0 A 2599 0 U
2669 0 G 2670 0 U 2671 0 C 2672 0 U 2673 0 G 2674
0 C 2685 0 C 2686 0 G 2687 0 U 2688 0 G 2692 0 G
2701 0 A 2702 0 A 2703 0 C 2704 0 U 2705 0 C 2707
0 G 2708 0 G 2709 0 A 2768 0 C 2769 0 G 2770 0 G
2771 0 C 2804 0 A 2805 0 C 2806 0 G 2810 0 A 2811
0 A 2812 0 A 2827 0 G 2828 0 G 2829 0 U 2830 0 C
2844 0 G 2845 0 C 2846 0 G 2847 0 G 2848 0 U 2849
0 C 2850 0 SR 9462 0
9 1.69 1.69 164.0 -1.25 -0.73 14.6 84 8 9 3 1 1 0 0  A 37 0 G 38 0 G 209 0 U 210 0 C 298 0 A 319 0 G
320 0 A 321 0 G 322 0 C 330 0 A 331 0 G 332 0 C
338 0 A 340 0 A 347 0 G 446 0 A 447 0 G 648 0 U
649 0 C 650 0 U 651 0 G 652 0 C 653 0 U 655 0 G
656 0 G 657 0 A 659 0 A 665 0 A 666 0 C 667 0 C
668 0 A 671 0 U 673 0 A 674 0 U 675 0 G 683 0 G
747 0 C 748 0 C 749 0 A 750 0 A 1307 0 NA 9104 C
CD 9205 O
10 2.06 2.04 165.2 -0.76 -0.78 6.6 89 4 1 3 0 0 1 0  G 1235 0 U 1977 0 A 1978 0 C 1982 0 C 1983 0 U
1984 0 U 1985 0 G 1986 0 C 1988 0 G 1989 0 C 1990
0 A 1991 0 G 1995 0 U 1996 0 A 1997 0 C 1999 0 A
2083 0 C 2084 0 C 2526 0 U 2527 0 G 2544 0 C 2549
0 U 2550 0 G 2579 0 G 2580 0 OMU 2587 0 OMG 2588
0 U 2589 0 U 2590 0 C 2591 0 A 2604 0 G 2605 0 C
2608 0 G 2639 0 U 2640 0 U 2655 0 G 2657 0 G 2658
0 U 2659 0 U 2669 0 G 2670 0 A 2677 0 A 2678 0 G
2679 0 A 2680 0 G 2809 0 A 2812 0 A 2827 0 G 2828
0 G 2829 0 U 2830 0 C 2844 0 G 2845 0 C 2846 0 G
2847 0 G 2848 0 U 2849 0 C 2850 0 MG 8108 0 SR
9601 0 DCZ 74 4 DC 75 4
11 1.39 1.39 172.3 -0.87 -0.74 9.1 86 7 3 5 2 1 0 0  C 40 0 G 41 0 U 43 0 G 44 0 G 47 0 A 48 0 A 49 0
G 76 0 G 77 0 G 78 0 G 79 0 C 101 0 A 102 0 U 103
0 G 104 0 G 105 0 U 108 0 U 109 0 C 110 0 C 111 0
A 114 0 G 116 0 C 124 0 U 125 0 A 128 0 A 129 0 U
299 0 C 300 0 G 301 0 A 302 0 C 303 0 G 304 0 A
305 0 A 306 0 G 307 0 U 308 0 C 309 0 C 344 0 G
345 0 A 352 0 G 353 0 A 354 0 C 443 0 C 444 0 G
1449 0 G 1670 0 U 1671 0 G 1672 0 U 1673 0
12 1.71 1.71 172.2 -0.98 -0.79 10.9 82 3 10 1 0 1 0 0  A 37 0 G 38 0 C 208 0 G 209 0 G 213 0 U 214 0 G
223 0 U 224 0 G 225 0 C 298 0 A 319 0 G 320 0 A
321 0 G 322 0 C 330 0 A 331 0 G 332 0 C 338 0 A
340 0 A 347 0 C 440 0 G 446 0 A 447 0 U 647 0 G
648 0 U 649 0 C 650 0 U 651 0 G 652 0 A 666 0 C
667 0 C 668 0 A 671 0 U 673 0 A 674 0 U 675 0 G
724 0 C 725 0 C 726 0 G 740 0 C 741 0 G 742 0 C
757 0 A 758 0 C 759 0 G 1036 0 G 1037 0 A 1307 0
U 2387 0 C 2396 0 NA 9104 C
13 1.57 1.57 179.6 -1.10 -0.75 12.3 88 9 7 6 2 0 0 0  A 37 0 G 38 0 G 209 0 U 210 0 C 298 0 U 299 0 C
300 0 G 301 0 A 302 0 C 303 0 G 304 0 A 305 0 A
306 0 G 307 0 U 308 0 C 309 0 C 344 0 G 345 0 U
346 0 A 347 0 G 446 0 G 648 0 U 649 0 C 650 0 U
651 0 G 652 0 C 653 0 U 655 0 G 656 0 G 657 0 A
659 0 A 665 0 A 666 0 C 667 0 C 668 0 A 671 0 U
673 0 A 674 0 U 675 0 G 683 0 G 747 0 C 748 0 C
749 0 A 750 0 NA 9104 C CD 9205 O
14 2.94 2.96 178.6 -0.93 -0.79 10.2 88 4 6 3 0 0 0 0  U 1383 0 C 1384 0 G 1385 0 A 1393 0 C 1394 0 C
1396 0 C 1397 0 G 1410 0 A 1411 0 C 1421 0 G 1438
0 G 1452 0 U 1488 0 G 1491 0 A 1493 0 A 1494 0 C
1495 0 G 1496 0 G 1497 0 U 1505 0 U 1531 0 G 1532
0 C 1575 0 G 1576 0 U 1577 0 G 1614 0 A 1615 0 A
1616 0 C 1617 0 A 1661 0 C 1662 0 G 1663 0 C 1680
0 A 1685 0 C 1699 0 C 1700 0 G 1719 0 C 1720 0 C
1721 0 G 1727 0 G 1728 0 A 1729 0 A 2827 0 G 2828
0 G 2829 0 U 2830 0 C 2831 0 C 2832 0 C 2833 0 C
2835 0 G 2842 0 A 2843 0 C 2844 0 G 2845 0 C 2846
0 G 2847 0 G 2848 0 U 2849 0 C 2850 0
15 1.72 1.72 180.9 -0.95 -0.74 9.8 81 4 6 3 1 2 1 0  G 47 0 A 48 0 A 49 0 G 64 0 C 65 0 C 101 0 A 102
0 U 103 0 G 104 0 G 105 0 U 107 0 U 108 0 U 109 0
C 110 0 C 111 0 A 114 0 G 116 0 C 124 0 U 125 0 A
128 0 A 129 0 C 300 0 G 301 0 A 319 0 G 320 0 A
321 0 G 322 0 C 330 0 A 331 0 G 332 0 C 338 0 A
340 0 U 346 0 A 347 0 C 443 0 C 444 0 U 445 0 G
446 0 A 447 0 U 673 0 A 1307 0 G 1449 0 G 1670 0
U 1671 0 G 1672 0 U 1673 0 NA 9129 0
16 1.42 1.42 185.5 -0.83 -0.81 8.7 87 4 8 4 1 0 0 0  A 37 0 G 38 0 C 208 0 G 209 0 G 213 0 U 214 0 G
223 0 U 224 0 G 225 0 A 226 0 C 298 0 U 299 0 C
300 0 G 301 0 A 302 0 C 303 0 G 304 0 A 305 0 A
306 0 G 307 0 U 308 0 C 309 0 C 344 0 G 345 0 U
346 0 A 347 0 C 440 0 G 446 0 U 647 0 G 648 0 U
649 0 C 650 0 U 651 0 G 652 0 A 666 0 C 667 0 C
668 0 A 671 0 U 673 0 A 674 0 U 675 0 G 724 0 C
725 0 C 726 0 G 740 0 C 741 0 G 742 0 C 757 0 A
758 0 C 759 0 G 1036 0 G 1037 0 U 2387 0 C 2396 0
NA 9104 C
17 2.32 2.32 190.0 -1.03 -0.77 10.5 87 7 2 4 1 0 0 0  U 794 0 G 795 0 A 812 0 C 813 0 G 814 0 A 1729 0
G 1730 0 C 1731 0 A 1732 0 A 1733 0 C 1734 0 C
1735 0 A 1737 0 C 1738 0 G 1739 0 U 1740 0 U 1741
0 A 1755 0 G 1756 0 U 1757 0 U 1758 0 A 1759 0 C
1763 0 C 1764 0 G 1765 0 G 1777 0 A 1778 0 G 1780
0 G 1781 0 G 1782 0 A 1801 0 C 1810 0 A 1811 0 G
1819 0 C 2031 0 U 2032 0 G 2033 0 U 2034 0 A 2039
0 G 2041 0 U 2042 0 C 2752 0 G 2753 0 G 2758 0 C
2759 0 A 2827 0 G 2828 0 G 2829 0 U 2830 0 C 2831
0 C 2832 0 C 2833 0 C 2835 0 G 2836 0 U 2837 0 A
2838 0 C 2839 0 G 2842 0 A 2843 0 C 2844 0 G 2845
0 C 2846 0 G 2847 0 G 2848 0 U 2849 0 C 2850 0 NA
9140 0 SR 9484 0
18 1.65 1.65 188.9 -1.32 -0.69 16.6 81 11 11 1 3 1 0 0  C 29 0 C 31 0 C 87 0 A 319 0 G 320 0 A 321 0 G
322 0 C 330 0 G 332 0 G 333 0 G 334 0 U 335 0 A
337 0 C 338 0 A 339 0 A 340 0 A 462 0 G 479 0 C
480 0 U 481 0 G 482 0 C 483 0 A 484 0 A 495 0 G
496 0 A 498 0 G 499 0 G 514 0 C 1342 0 A 1390 0 G
1391 0 A 1392 0 A 1427 0 A 1434 0 G 1727 0 G 1728
0 A 1729 0 G 2828 0 G 2829 0 U 2830 0 C 2831 0 C
2832 0 C 2833 0 C 2835 0 G 2842 0 A 2843 0 C 2844
0 G 2845 0 C 2846 0 G 2847 0 G 2848 0 U 2849 0 C
2850 0
19 2.12 2.12 196.5 -0.78 -0.77 8.5 85 4 4 1 1 0 1 0  G 724 0 A 913 0 A 914 0 C 915 0 A 929 0 C 930 0 G
941 0 U 942 0 A 943 0 C 1033 0 G 1034 0 G 1046 0
U 1047 0 G 1048 0 C 1049 0 C 1051 0 A 1058 0 G
1059 0 C 1060 0 C 1061 0 U 1062 0 G 1063 0 U 1064
0 G 1065 0 U 1066 0 U 1120 0 C 1126 0 C 1127 0 U
1128 0 C 1129 0 U 1130 0 G 1131 0 A 1231 0 A 1232
0 G 1235 0 A 1236 0 U 1237 0 C 1238 0 G 2068 0 A
2083 0 C 2084 0 C 2393 0 U 2492 0 C 2493 0 G 2524
0 G 2525 0 U 2550 0 C 2551 0 C 2552 0 A 2577 0 G
2578 0 U 2655 0 G 2657 0 G 2658 0 U 2659 0 U 2669
0 G 2670 0 A 2677 0 A 2678 0 G 2679 0 G 2809 0 A
2812 0 A 2827 0 G 2828 0 G 2829 0 U 2830 0 C 2844
0 G 2845 0 C 2846 0 G 2847 0 G 2848 0 U 2849 0 C
2850 0 MG 8025 0 C 3091 9 G 3092 9 A 3093 9
20 2.27 2.27 215.6 -1.23 -0.76 14.7 85 8 12 5 2 1 0 0  C 34 0 U 35 0 C 36 0 A 37 0 G 47 0 A 48 0 A 49 0
G 50 0 G 51 0 U 63 0 G 64 0 C 65 0 G 66 0 U 108 0
U 109 0 C 110 0 C 111 0 A 114 0 G 116 0 C 124 0 U
125 0 A 128 0 A 129 0 A 151 0 G 209 0 U 210 0 C
440 0 A 441 0 A 442 0 C 443 0 G 458 0 A 459 0 G
464 0 G 648 0 U 649 0 C 650 0 U 651 0 G 652 0 C
653 0 U 655 0 G 656 0 G 657 0 A 659 0 A 665 0 A
666 0 G 683 0 G 747 0 C 748 0 C 749 0 A 750 0 G
1449 0 G 1670 0 U 1671 0 G 1672 0 U 1673 0 NA
9104 C CD 9205 O
21 2.02 2.00 217.3 -1.25 -0.75 15.1 81 11 12 3 2 1 1 0  A 37 0 U 133 0 U 146 0 G 147 0 A 148 0 G 149 0 G
150 0 C 153 0 C 154 0 U 176 0 A 177 0 U 178 0 C
179 0 G 180 0 G 181 0 G 182 0 A 183 0 C 208 0 G
209 0 U 210 0 C 440 0 U 647 0 G 648 0 U 649 0 C
650 0 U 651 0 G 652 0 C 653 0 U 655 0 G 656 0 G
657 0 A 659 0 A 665 0 A 666 0 G 683 0 G 747 0 C
748 0 C 749 0 A 750 0 A 1458 0 A 1459 0 G 1460 0
U 1461 0 C 1462 0 A 1463 0 U 1464 0 A 1465 0 C
1466 0 C 1467 0 C 1472 0 U 1473 0 G 1475 0 A 1476
0 C 1477 0 U 1478 0 A 1479 0 U 1480 0 A 1533 0 C
1534 0 G 1655 0 A 1657 0 A 1658 0 C 1872 0 SR
9414 0 SR 9460 1 NA 9104 C CD 9205 O
22 2.05 2.15 219.6 -0.52 -0.76 5.2 83 2 2 1 1 0 1 0  G 911 0 A 913 0 A 914 0 C 915 0 C 930 0 C 931 0 A
943 0 G 1024 0 C 1026 0 G 1027 0 U 1028 0 U 1030
0 G 1031 0 A 1032 0 C 1033 0 G 1046 0 U 1047 0 G
1048 0 C 1049 0 C 1051 0 A 1058 0 G 1059 0 C 1060
0 C 1061 0 U 1062 0 G 1063 0 U 1064 0 G 1065 0 U
1066 0 A 1067 0 C 1068 0 C 1126 0 C 1127 0 U 1128
0 A 1287 0 U 1288 0 C 1289 0 U 1977 0 A 1978 0 C
1982 0 C 1983 0 U 1984 0 U 1985 0 G 1986 0 C 1988
0 G 1989 0 C 1990 0 A 1991 0 G 1995 0 U 1996 0 A
1997 0 C 1999 0 C 2493 0 G 2494 0 C 2496 0 A 2497
0 C 2498 0 U 2499 0 G 2516 0 A 2517 0 C 2518 0 G
2520 0 A 2521 0 G 2522 0 U 2523 0 U 2527 0 C 2555
0 G 2572 0 G 2573 0 OMU 2587 0 OMG 2588 0 U 2589
0 U 2590 0 C 2591 0 G 2592 0 G 2602 0 G 2603 0 A
2604 0 G 2639 0 U 2640 0 MG 8108 0 SR 9601 0 DCZ
74 4 DC 75 4 C 3091 9 G 3092 9 A 3093 9 SR 9481 9
23 2.94 2.94 218.8 -1.27 -0.76 13.8 76 6 7 2 0 2 0 0  U 1383 0 C 1384 0 G 1385 0 A 1393 0 C 1394 0 C
1396 0 C 1397 0 G 1398 0 A 1399 0 C 1400 0 G 1401
0 G 1402 0 G 1449 0 G 1498 0 U 1499 0 C 1508 0 C
1509 0 G 1510 0 U 1511 0 G 1556 0 G 1557 0 C 1558
0 G 1627 0 G 1628 0 G 1629 0 A 1630 0 A 1631 0 A
1716 0 C 1721 0 G 1727 0 G 1728 0 A 1729 0 A 2827
0 G 2828 0 G 2829 0 U 2830 0 C 2831 0 C 2832 0 C
2833 0 C 2835 0 G 2842 0 A 2843 0 C 2844 0 G 2845
0 C 2846 0 G 2847 0 G 2848 0 U 2849 0 C 2850 0
24 1.62 1.60 218.7 -1.37 -0.69 17.0 83 16 10 4 4 0 1 0  C 31 0 C 62 0 U 63 0 G 77 0 G 78 0 G 79 0 C 85 0
A 86 0 C 101 0 A 102 0 G 301 0 A 302 0 C 303 0 G
304 0 A 305 0 A 306 0 G 307 0 U 308 0 C 309 0 C
344 0 G 345 0 C 444 0 U 445 0 C 461 0 A 462 0 G
479 0 C 480 0 A 495 0 G 496 0 A 498 0 G 499 0 G
514 0 A 1390 0 G 1391 0 A 1392 0 A 1427 0 A 1434
0 G 1727 0 G 1728 0 A 1729 0 G 2828 0 G 2829 0 U
2830 0 C 2831 0 C 2832 0 C 2833 0 C 2835 0 G 2842
0 A 2843 0 C 2844 0 G 2845 0 C 2846 0 G 2847 0 G
2848 0 U 2849 0 C 2850 0
25 1.81 1.86 225.5 -1.12 -0.67 11.6 84 10 4 4 3 1 0 0  C 29 0 C 31 0 C 87 0 A 319 0 G 320 0 A 321 0 G
322 0 C 330 0 G 332 0 G 333 0 G 334 0 U 335 0 A
337 0 C 338 0 A 339 0 A 340 0 A 462 0 A 466 0 G
467 0 A 476 0 G 479 0 C 480 0 U 481 0 G 482 0 C
483 0 A 484 0 G 514 0 U 845 0 C 1342 0 A 1427 0 C
1428 0 U 1977 0 A 1978 0 C 1982 0 U 1984 0 U 1985
0 G 1986 0 C 1988 0 G 1989 0 C 1990 0 A 1991 0 G
1995 0 U 1996 0 A 1997 0 C 1999 0 G 2099 0 A 2100
0 A 2103 0 U 2541 0 OMU 2587 0 OMG 2588 0 U 2589
0 G 2616 0 G 2618 0 UR3 2619 0 U 2620 0 A 2637 0
G 2639 0 U 2640 0 G 2643 0 C 2644 0 U 2645 0 G
2646 0 MG 8108 0 SR 9601 0 DC 75 4 PPU 76 4
26 2.52 2.53 269.6 -1.40 -0.73 17.6 84 17 18 4 4 0 0 0  C 31 0 G 32 0 G 33 0 C 34 0 U 35 0 C 36 0 A 37 0
G 50 0 C 62 0 U 63 0 C 85 0 A 86 0 A 151 0 G 209
0 U 210 0 C 440 0 A 441 0 A 442 0 C 443 0 G 458 0
A 459 0 C 461 0 A 462 0 A 463 0 G 464 0 G 479 0 C
480 0 A 495 0 G 496 0 A 498 0 G 499 0 G 514 0 G
648 0 U 649 0 C 650 0 U 651 0 G 652 0 C 653 0 U
655 0 G 656 0 G 657 0 A 659 0 A 665 0 A 666 0 G
683 0 G 747 0 C 748 0 C 749 0 A 750 0 A 1390 0 G
1391 0 A 1392 0 A 1427 0 A 1434 0 G 1727 0 G 1728
0 A 1729 0 G 2828 0 G 2829 0 U 2830 0 C 2831 0 C
2832 0 C 2833 0 C 2835 0 G 2842 0 A 2843 0 C 2844
0 G 2845 0 C 2846 0 G 2847 0 G 2848 0 U 2849 0 C
2850 0 NA 9104 C CD 9205 O
27 1.61 1.59 283.7 -0.84 -0.75 9.2 86 10 5 6 4 0 1 1  C 40 0 G 41 0 C 42 0 U 43 0 G 44 0 G 76 0 G 77 0
G 78 0 G 79 0 C 101 0 A 102 0 U 103 0 G 104 0 U
133 0 A 145 0 U 146 0 G 147 0 G 182 0 A 183 0 G
184 0 G 185 0 G 289 0 U 299 0 C 300 0 G 301 0 A
302 0 C 303 0 G 304 0 A 305 0 A 306 0 G 307 0 U
308 0 C 309 0 C 344 0 G 345 0 A 352 0 G 353 0 A
354 0 C 355 0 G 358 0 U 359 0 C 444 0 A 1459 0 G
1460 0 U 1461 0 C 1462 0 A 1463 0 U 1464 0 A 1465
0 C 1466 0 C 1467 0 C 1472 0 U 1473 0 G 1475 0 A
1476 0 C 1477 0 U 1478 0 A 1479 0 U 1480 0 C 1856
0 A 1857 0 A 1858 0 A 1859 0 C 1861 0 G 1863 0 G
1867 0 G 1868 0 C 1870 0 U 1871 0 C 1872 0 G 2125
0 C 2126 0 U 2240 0 C 2241 0 C 2247 0 C 2248 0 A
2255 0 G 2256 0 G 2257 0 A 2260 0 C 2261 0 C 2262
0 SR 9497 A
28 1.80 1.82 276.6 -1.01 -0.76 11.2 81 7 10 1 1 1 1 0  A 37 0 G 38 0 U 133 0 U 146 0 G 147 0 A 148 0 G
149 0 G 150 0 C 153 0 C 154 0 A 174 0 U 176 0 A
177 0 U 178 0 C 179 0 G 180 0 G 181 0 G 182 0 A
183 0 C 208 0 G 209 0 C 298 0 A 319 0 G 320 0 A
321 0 G 322 0 C 330 0 A 331 0 G 332 0 C 338 0 A
340 0 A 347 0 C 440 0 G 446 0 A 447 0 U 647 0 A
666 0 C 667 0 C 668 0 A 671 0 U 673 0 A 674 0 U
675 0 A 1307 0 A 1459 0 G 1460 0 U 1461 0 C 1462
0 A 1463 0 U 1464 0 A 1465 0 C 1466 0 C 1467 0 C
1472 0 U 1473 0 G 1475 0 A 1476 0 C 1477 0 U 1478
0 A 1479 0 U 1480 0 C 1856 0 A 1857 0 A 1858 0 A
1859 0 C 1861 0 G 1863 0 G 1867 0 G 1868 0 C 1870
0 U 1871 0 C 1872 0 G 2125 0 C 2126 0 U 2240 0 C
2241 0 C 2247 0 C 2248 0 A 2255 0 G 2256 0 G 2257
0 A 2260 0 C 2261 0 C 2262 0 SR 9414 0 SR 9460 1
SR 9497 A NA 9104 C
29 2.67 2.68 271.9 -1.15 -0.73 14.2 80 11 14 1 3 1 0 0  C 31 0 G 32 0 G 33 0 C 34 0 U 35 0 G 50 0 C 62 0
U 63 0 C 85 0 A 86 0 A 151 0 A 174 0 U 176 0 A
177 0 C 208 0 G 213 0 U 214 0 G 223 0 U 224 0 G
225 0 C 440 0 A 441 0 A 442 0 C 443 0 G 458 0 A
459 0 C 461 0 A 462 0 A 463 0 G 464 0 G 479 0 C
480 0 A 495 0 G 496 0 A 498 0 G 499 0 G 514 0 U
647 0 G 648 0 U 649 0 C 650 0 U 651 0 G 652 0 A
686 0 G 690 0 U 701 0 G 702 0 G 703 0 C 704 0 G
720 0 A 721 0 G 722 0 G 723 0 G 724 0 G 742 0 G
743 0 G 744 0 C 757 0 A 758 0 C 759 0 G 1036 0 A
1390 0 G 1391 0 A 1392 0 A 1427 0 A 1434 0 G 1727
0 G 1728 0 A 1729 0 A 2827 0 G 2828 0 G 2829 0 U
2830 0 C 2831 0 C 2832 0 C 2833 0 C 2835 0 G 2842
0 A 2843 0 C 2844 0 G 2845 0 C 2846 0 G 2847 0 G
2848 0 U 2849 0 C 2850 0 SR 9433 0
30 1.58 1.57 315.0 -1.16 -0.69 12.2 86 16 4 8 4 0 1 0  C 31 0 C 62 0 U 63 0 G 77 0 G 78 0 G 79 0 C 85 0
A 86 0 C 101 0 A 102 0 C 300 0 G 301 0 A 302 0 C
303 0 G 304 0 A 305 0 A 306 0 G 307 0 U 308 0 C
309 0 C 344 0 G 345 0 C 444 0 U 445 0 C 461 0 A
462 0 A 466 0 G 467 0 A 476 0 G 479 0 C 480 0 G
514 0 U 845 0 A 1427 0 C 1428 0 C 1983 0 G 2099 0
A 2100 0 A 2103 0 C 2496 0 A 2497 0 C 2498 0 U
2527 0 U 2541 0 C 2555 0 C 2556 0 U 2557 0 A 2569
0 G 2570 0 C 2571 0 U 2590 0 C 2591 0 G 2592 0 A
2599 0 A 2600 0 A 2601 0 G 2602 0 G 2603 0 A 2604
0 G 2616 0 G 2618 0 UR3 2619 0 U 2620 0 A 2637 0
G 2638 0 G 2639 0 G 2643 0 C 2644 0 U 2645 0 G
2646 0 C 2686 0 G 2687 0 U 2688 0 G 2692 0 G 2701
0 A 2702 0 DCZ 74 4 DC 75 4 PPU 76 4
31 1.08 1.08 35.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  A 1173 0 A 1174 0 C 1176 0 A 1177 0 G 1178 0 C
1179 0 U 1180 0 A 1181 0 A 1194 0 G 1195 0 C 1196
0 G 1197 0 U 1198 0 A 1200 0 C 1201 0 A 2509 0 C
2510 0
32 1.42 1.42 40.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 1162 0 G 1163 0 U 1164 0 A 1166 0 G 1175 0 C
1176 0 G 1178 0 C 1179 0 U 1180 0 A 1181 0 C 1183
0 C 1184 0 U 1185 0 G 1190 0 A 1191 0 A 1192 0 A
1193 0 A 1194 0 G 1195 0 C 1196 0 A 2509 0
33 1.21 1.21 41.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 1158 0 G 1159 0 G 1160 0 A 1161 0 A 1173 0 G
1175 0 C 1176 0 A 1177 0 G 1197 0 U 1198 0 A 1200
0 C 1201 0 A 1202 0 G 1203 0 C 1204 0 U 1205 0 A
2509 0
34 1.21 1.21 60.5 -0.23 -0.68 2.9 90 0 0 1 2 0 1 0  U 1164 0 G 1165 0 A 1166 0 G 1167 0 A 1173 0 A
1174 0 C 1176 0 G 1178 0 C 1179 0 U 1180 0 A 1181
0 C 1182 0 A 1192 0 A 1193 0 A 1194 0 G 1195 0 C
1196 0 A 2509 0

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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