spacer
spacer

PDBsum entry 1vqo

Go to PDB code: 
Top Page protein dna_rna metals Protein-protein interface(s) pores links
Pore analysis for: 1vqo calculated with MOLE 2.0 PDB id
1vqo
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
33 pores, coloured by radius 33 pores, coloured by radius 33 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.84 2.84 87.8 -1.31 -0.81 14.4 79 3 5 2 0 0 0 0  A 11 0 U 12 0 G 13 0 C 14 0 C 15 0 A 16 0 G 17 0
C 18 0 U 19 0 G 20 0 A 509 0 U 510 0 A 519 0 A
520 0 U 522 0 C 523 0 A 524 0 G 525 0 U 526 0 A
1321 0 A 1337 0 U 1338 0 A 2910 0 C 2911 0 SR
9488 0
2 2.99 2.99 100.6 -1.64 -0.82 19.7 82 3 6 2 1 0 0 0  U 1383 0 C 1384 0 G 1385 0 A 1393 0 C 1394 0 C
1396 0 C 1397 0 G 1398 0 A 1399 0 C 1400 0 G 1401
0 G 1402 0 G 1556 0 G 1557 0 C 1558 0 A 1630 0 A
1716 0 C 1721 0 G 1727 0 G 1728 0 C 2737 0 C 2831
0 C 2832 0 C 2833 0 A 2908 0 G 2909 0 A 2910 0 C
2911 0
3 1.84 1.84 107.3 -0.47 -0.80 3.9 100 1 0 1 0 0 0 0  A 507 0 A 508 0 A 509 0 U 510 0 G 564 0 A 565 0 G
1265 0 U 1266 0 C 1267 0 C 1268 0 G 1269 0 U 1270
0 C 1272 0 U 1279 0 A 1280 0 C 1281 0 U 1282 0 G
1283 0 G 1284 0 U 1285 0 G 1299 0 G 1300 0 C 1301
0 G 1302 0 C 1303 0 G 1316 0 A 1317 0 A 1318 0 G
1319 0 U 1320 0 C 1332 0 U 1333 0 C 1334 0 U 1336
0 A 1337 0 U 1338 0 G 1339 0 G 1340 0 G 1344 0 A
1345 0 U 1346 0 U 1347 0 A 1348 0 G 1349 0 U 1350
0 SR 9585 0
4 2.37 2.37 122.0 -1.02 -0.78 12.8 89 3 5 1 1 0 0 0  G 564 0 A 565 0 A 566 0 G 583 0 U 584 0 C 585 0 G
588 0 U 589 0 A 1133 0 G 1135 0 U 1136 0 G 1137 0
U 1141 0 C 1153 0 A 1154 0 C 1208 0 U 1218 0 U
1219 0 U 1220 0 G 1221 0 A 1222 0 G 1223 0 G 1224
0 C 1251 0 A 1252 0 C 1253 0 C 1254 0 A 1255 0 U
1266 0 C 2787 0 G 3088 9 C 3089 9 G 3092 9 C 3095
9 C 3096 9 U 3097 9
5 1.35 2.56 136.2 -0.44 -0.44 9.6 83 3 2 2 8 2 1 0  A 721 0 G 722 0 G 723 0 G 724 0 C 725 0 G 739 0 G
740 0 C 741 0 G 742 0 G 743 0 G 747 0 C 936 0 C
937 0 G 1036 0 A 2356 0 U 2358 0 G 2359 0 C 2360
0 A 2361 0 A 2362 0 G 2363 0 A 2364 0 U 2384 0 G
2385 0 U 2386 0 U 2387 0 C 2396 0 G 2397 0 A 2398
0 G 2399 0 G 2400 0 A 2401 0 U 2419 0 G 2420 0 G
2421 0 U 2422 0 C 2423 0 U 2424 0 G 2426 0 C 2427
0
6 1.99 1.99 134.8 -0.59 -0.75 4.9 77 1 1 1 0 0 2 0  G 564 0 A 565 0 A 694 0 C 695 0 U 733 0 U 734 0 C
735 0 G 740 0 C 741 0 U 909 0 G 928 0 A 929 0 C
930 0 C 931 0 U 932 0 C 933 0 C 934 0 G 1031 0 A
1032 0 C 1033 0 G 1034 0 C 1035 0 G 1036 0 G 1037
0 G 1265 0 U 1266 0 C 1267 0 C 1268 0 G 1269 0 U
1270 0 A 1271 0 C 1272 0 U 1279 0 A 1280 0 C 1281
0 U 1282 0 G 1283 0 G 1284 0 U 1285 0 U 1298 0 G
1299 0 G 2383 0 U 2384 0 G 2385 0 A 2395 0 C 2396
0 G 2397 0 A 2398 0 A 2437 0 G 2438 0 C 2439 0 A
2455 0 A 2456 0
7 1.88 1.93 137.2 -1.02 -0.68 12.1 86 5 5 4 2 0 1 0  A 11 0 U 12 0 G 13 0 C 14 0 C 15 0 A 16 0 G 17 0
C 18 0 A 520 0 A 521 0 U 522 0 C 523 0 A 524 0 G
525 0 U 526 0 G 553 0 G 554 0 U 555 0 C 563 0 G
564 0 A 565 0 U 595 0 C 596 0 A 597 0 G 607 0 A
608 0 U 609 0 G 610 0 G 1265 0 U 1266 0 G 1322 0
G 1323 0 G 1324 0 U 1326 0 A 2910 0 C 2911 0
8 1.94 1.95 143.9 -0.72 -0.78 7.0 80 0 3 1 1 1 0 0  U 214 0 G 564 0 A 565 0 U 651 0 G 652 0 C 685 0 A
686 0 G 689 0 G 690 0 G 691 0 C 695 0 C 696 0 C
741 0 G 742 0 U 909 0 G 928 0 A 929 0 C 930 0 C
931 0 U 932 0 C 933 0 C 934 0 G 1031 0 A 1032 0 C
1033 0 G 1034 0 C 1035 0 G 1036 0 G 1037 0 G 1265
0 U 1266 0 C 1267 0 C 1268 0 G 1269 0 U 1270 0 A
1271 0 C 1272 0 U 1279 0 A 1280 0 C 1281 0 U 1282
0 G 1283 0 G 1284 0 U 1285 0 U 1298 0 G 1299 0 A
2395 0 C 2396 0
9 2.82 2.82 142.6 -1.35 -0.75 16.5 76 8 7 1 1 0 1 0  U 488 0 A 495 0 G 496 0 A 498 0 G 499 0 G 500 0 G
501 0 A 502 0 G 503 0 A 509 0 U 510 0 G 512 0 A
513 0 G 514 0 U 1338 0 U 1383 0 C 1384 0 G 1385 0
G 1386 0 A 1390 0 G 1391 0 A 1392 0 A 1393 0 C
1394 0 C 1396 0 C 1397 0 G 1398 0 A 1399 0 C 1400
0 G 1401 0 G 1402 0 A 1427 0 A 1434 0 G 1556 0 G
1557 0 C 1558 0 A 1630 0 A 1716 0 C 1721 0 C 2737
0 SR 9432 0
10 2.35 2.35 162.7 -0.60 -0.79 5.0 68 0 2 1 0 1 1 0  G 564 0 A 565 0 G 739 0 G 740 0 C 741 0 U 909 0 G
928 0 A 929 0 C 930 0 C 931 0 U 932 0 C 933 0 C
934 0 G 1031 0 A 1032 0 C 1033 0 G 1034 0 C 1035
0 G 1036 0 G 1037 0 G 1265 0 U 1266 0 C 1267 0 C
1268 0 G 1269 0 U 1270 0 A 1271 0 C 1272 0 U 1279
0 A 1280 0 C 1281 0 U 1282 0 G 1283 0 G 1284 0 U
1285 0 U 1298 0 G 1299 0 A 2356 0 U 2358 0 G 2359
0 C 2360 0 A 2361 0 A 2362 0 G 2363 0 A 2364 0 U
2384 0 G 2385 0 U 2386 0 U 2387 0 A 2395 0 C 2396
0 G 2397 0 A 2398 0 G 2399 0 G 2400 0 A 2401 0 U
2419 0 G 2420 0 G 2421 0 U 2422 0 C 2423 0 U 2424
0 G 2426 0 C 2427 0
11 2.85 2.98 162.6 -1.18 -0.82 13.6 87 3 7 3 1 0 0 0  U 1383 0 C 1384 0 G 1385 0 A 1393 0 C 1394 0 C
1396 0 C 1397 0 G 1410 0 A 1411 0 C 1421 0 G 1438
0 G 1452 0 U 1488 0 G 1491 0 A 1493 0 A 1494 0 C
1495 0 G 1496 0 G 1497 0 U 1503 0 A 1504 0 U 1505
0 A 1528 0 G 1529 0 U 1530 0 U 1531 0 G 1532 0 C
1613 0 G 1614 0 A 1615 0 A 1616 0 C 1617 0 A 1661
0 C 1662 0 G 1663 0 C 1680 0 A 1685 0 C 1699 0 C
1700 0 C 1720 0 C 1721 0 G 1727 0 G 1728 0 C 2831
0 C 2832 0 C 2833 0 A 2908 0 G 2909 0 A 2910 0 C
2911 0 MG 8029 0
12 2.55 2.76 173.1 -0.81 -0.78 8.8 84 4 3 1 1 0 1 0  U 488 0 A 489 0 A 495 0 G 496 0 A 497 0 A 498 0 G
499 0 G 500 0 G 501 0 A 502 0 G 503 0 A 509 0 U
510 0 U 1338 0 U 1388 0 G 1389 0 A 1390 0 G 1391
0 G 1410 0 A 1411 0 C 1421 0 U 1422 0 C 1423 0 A
1424 0 G 1425 0 C 1426 0 A 1427 0 U 1435 0 C 1436
0 A 1437 0 G 1438 0 G 1452 0 U 1488 0 G 1491 0 A
1493 0 A 1494 0 C 1495 0 G 1496 0 G 1497 0 U 1503
0 A 1504 0 U 1505 0 A 1528 0 G 1529 0 U 1530 0 U
1531 0 G 1532 0 C 1613 0 G 1614 0 A 1615 0 A 1616
0 C 1617 0 A 1661 0 C 1662 0 G 1663 0 C 1680 0 A
1685 0 C 1699 0 C 1700 0 C 1720 0 MG 8029 0 MG
8082 0 SR 9432 0
13 2.15 2.11 175.3 -0.95 -0.80 10.2 85 3 7 3 0 0 1 0  U 1120 0 G 1121 0 G 1131 0 A 1132 0 A 1133 0 G
1135 0 U 1136 0 G 1137 0 U 1141 0 C 1153 0 A 1154
0 C 1208 0 U 1218 0 U 1219 0 U 1220 0 G 1221 0 A
1222 0 G 1223 0 G 1224 0 C 1225 0 G 1226 0 C 1227
0 C 1228 0 A 1230 0 A 1231 0 A 1232 0 G 1235 0 A
1236 0 C 1238 0 A 2083 0 C 2084 0 U 2550 0 C 2551
0 C 2552 0 A 2577 0 G 2578 0 U 2655 0 G 2657 0 G
2658 0 U 2659 0 G 2660 0 G 2662 0 G 2668 0 U 2669
0 A 2677 0 A 2678 0 G 2679 0 C 2787 0 G 2809 0 A
2812 0 G 2829 0 U 2830 0 C 2844 0 A 2910 0 C 2911
0 C 2912 0 MG 8025 0 C 3091 9
14 2.21 2.21 175.1 -1.05 -0.72 12.1 82 8 3 1 1 0 1 0  C 31 0 G 47 0 A 48 0 A 49 0 C 62 0 U 63 0 G 64 0
C 65 0 A 74 0 C 85 0 A 86 0 C 87 0 A 102 0 U 103
0 G 104 0 G 105 0 A 106 0 U 107 0 U 108 0 U 109 0
C 110 0 C 443 0 C 444 0 C 461 0 A 462 0 G 479 0 C
480 0 U 488 0 G 499 0 G 500 0 G 501 0 A 502 0 G
503 0 A 509 0 U 510 0 G 512 0 A 513 0 G 514 0 U
1338 0 A 1427 0 NA 9129 0 SR 9432 0
15 2.27 2.27 181.0 -1.10 -0.70 11.8 82 9 1 4 2 0 1 0  A 466 0 G 467 0 A 476 0 U 488 0 G 499 0 G 500 0 G
501 0 A 502 0 G 503 0 A 509 0 U 510 0 G 512 0 A
513 0 G 514 0 U 845 0 U 1338 0 A 1427 0 C 1428 0
U 1977 0 A 1978 0 C 1982 0 U 1984 0 U 1985 0 G
1986 0 C 1987 0 C 1988 0 G 1989 0 U 1996 0 A 1997
0 C 1999 0 G 2099 0 A 2100 0 A 2103 0 C 2104 0 A
2474 0 A 2538 0 OMU 2587 0 OMG 2588 0 U 2589 0 C
2593 0 G 2618 0 UR3 2619 0 U 2620 0 PSU 2621 0 A
2637 0 G 2638 0 G 2639 0 U 2640 0 C 2644 0 MG
8108 0 SR 9432 0 SR 9601 0 DC 75 4 PPU 76 4
16 2.09 2.08 183.5 -0.80 -0.80 7.1 87 3 4 4 0 0 1 0  G 1235 0 U 1977 0 A 1978 0 C 1982 0 C 1983 0 U
1984 0 U 1985 0 G 1986 0 C 1987 0 C 1988 0 G 1989
0 U 1996 0 A 1997 0 C 1999 0 A 2083 0 C 2084 0 C
2526 0 U 2527 0 U 2528 0 G 2544 0 C 2549 0 U 2550
0 G 2579 0 G 2580 0 OMU 2587 0 OMG 2588 0 U 2589
0 U 2590 0 C 2591 0 C 2593 0 A 2604 0 G 2605 0 C
2608 0 G 2638 0 G 2639 0 U 2640 0 U 2655 0 G 2657
0 G 2658 0 U 2659 0 G 2660 0 G 2662 0 G 2668 0 U
2669 0 A 2677 0 A 2678 0 G 2679 0 A 2680 0 G 2809
0 A 2812 0 G 2829 0 U 2830 0 C 2844 0 A 2910 0 C
2911 0 C 2912 0 MG 8108 0 MG 8118 0 SR 9601 0 DC
74 4 DC 75 4
17 2.86 3.01 186.7 -1.27 -0.81 15.0 86 5 9 3 2 0 0 0  G 787 0 U 1383 0 C 1384 0 G 1385 0 A 1393 0 C
1394 0 C 1396 0 C 1397 0 G 1410 0 A 1411 0 C 1421
0 G 1438 0 U 1488 0 G 1489 0 G 1490 0 G 1496 0 G
1497 0 U 1503 0 A 1504 0 U 1505 0 U 1530 0 A 1533
0 C 1534 0 G 1535 0 C 1617 0 A 1642 0 C 1643 0 C
1644 0 U 1645 0 G 1646 0 G 1647 0 G 1655 0 A 1657
0 C 1680 0 A 1685 0 C 1699 0 C 1700 0 C 1720 0 C
1721 0 G 1727 0 G 1728 0 C 2831 0 C 2832 0 C 2833
0 A 2908 0 G 2909 0 A 2910 0 C 2911 0 MG 8029 0
18 2.57 2.57 198.5 -1.12 -0.69 13.3 82 12 4 4 4 1 1 0  A 466 0 G 467 0 U 468 0 A 476 0 U 488 0 G 499 0 G
500 0 G 501 0 A 502 0 G 503 0 A 509 0 U 510 0 G
512 0 A 513 0 G 514 0 A 767 0 U 768 0 C 769 0 C
770 0 G 771 0 G 772 0 A 773 0 A 844 0 U 866 0 A
867 0 G 868 0 G 869 0 U 883 0 G 887 0 U 888 0 C
889 0 U 1338 0 A 1427 0 C 1428 0 A 1459 0 G 1460
0 U 1461 0 C 1474 0 G 1475 0 A 1476 0 C 1477 0 U
1478 0 A 1479 0 U 1530 0 A 1533 0 A 1657 0 A 1658
0 A 1689 0 C 1862 0 G 1863 0 A 1869 0 C 1872 0 SR
9432 0
19 2.21 2.18 203.5 -0.68 -0.80 7.2 84 3 5 2 0 0 1 0  G 13 0 C 14 0 C 15 0 A 16 0 G 17 0 C 18 0 U 19 0
G 20 0 A 509 0 U 510 0 A 519 0 A 520 0 U 522 0 C
523 0 U 1120 0 G 1121 0 G 1131 0 A 1132 0 A 1133
0 G 1135 0 U 1136 0 G 1137 0 U 1141 0 C 1153 0 A
1154 0 C 1208 0 U 1218 0 U 1219 0 U 1220 0 G 1221
0 A 1222 0 G 1223 0 G 1224 0 C 1225 0 G 1226 0 C
1227 0 C 1228 0 A 1230 0 A 1231 0 A 1232 0 G 1235
0 A 1236 0 C 1238 0 A 1321 0 A 1337 0 U 1338 0 C
1366 0 A 1367 0 C 2061 0 A 2062 0 A 2083 0 C 2084
0 A 2085 0 C 2086 0 C 2087 0 U 2550 0 C 2551 0 C
2552 0 A 2577 0 G 2578 0 C 2651 0 U 2652 0 A 2653
0 C 2654 0 U 2655 0 G 2657 0 A 2677 0 A 2678 0 G
2679 0 C 2787 0 G 2809 0 MG 8025 0 SR 9488 0 C
3091 9
20 1.99 2.03 213.3 -0.71 -0.75 7.6 89 1 5 4 3 1 0 0  U 214 0 U 651 0 G 652 0 C 685 0 A 686 0 G 689 0 G
690 0 G 691 0 C 695 0 C 696 0 C 741 0 G 742 0 A
913 0 A 914 0 C 915 0 G 928 0 A 929 0 C 930 0 C
931 0 U 932 0 A 943 0 G 956 0 C 1033 0 G 1034 0 C
1035 0 G 1036 0 G 1037 0 G 1046 0 U 1047 0 G 1048
0 C 1049 0 G 1050 0 C 1051 0 G 1052 0 G 1055 0 C
1060 0 C 1061 0 U 1062 0 G 1063 0 U 1064 0 G 1065
0 U 1066 0 A 1067 0 A 1133 0 G 1135 0 U 1136 0 G
1137 0 U 1141 0 C 1146 0 C 1153 0 A 1154 0 C 1208
0 U 1218 0 U 1219 0 U 1220 0 G 1221 0 A 1222 0 G
1223 0 G 1224 0 A 2395 0 C 2396 0 C 2787 0 SR
9413 0 A 3080 9 C 3081 9 G 3092 9 G 3094 9 C 3095
9 C 3096 9
21 1.43 1.67 210.0 -1.20 -0.75 15.8 82 8 15 1 2 1 0 0  G 564 0 A 565 0 A 566 0 G 583 0 U 584 0 C 585 0 G
588 0 U 589 0 G 1100 0 G 1119 0 U 1120 0 G 1121 0
U 1122 0 A 1124 0 G 1131 0 G 1226 0 C 1227 0 C
1228 0 A 1230 0 A 1231 0 U 1249 0 C 1250 0 C 1253
0 C 1254 0 A 1255 0 U 1266 0 C 2560 0 A 2694 0 C
2695 0 G 2696 0 A 2702 0 A 2703 0 C 2704 0 U 2705
0 G 2770 0 G 2771 0 G 2772 0 G 2773 0 U 2774 0 A
2775 0 A 2776 0 A 2792 0 A 2793 0 G 2794 0 C 2795
0 U 2796 0 G 2798 0 MG 8047 0 G 3088 9 C 3089 9 G
3090 9
22 2.29 2.29 215.6 -0.65 -0.79 7.2 87 2 4 0 1 0 0 0  G 564 0 A 565 0 A 566 0 G 583 0 U 584 0 C 585 0 G
588 0 U 589 0 G 1100 0 G 1119 0 U 1120 0 G 1121 0
U 1122 0 A 1124 0 G 1131 0 G 1226 0 C 1227 0 C
1228 0 C 1229 0 A 1230 0 A 1231 0 U 1249 0 C 1250
0 C 1253 0 C 1254 0 A 1255 0 U 1266 0 U 1977 0 A
1978 0 C 1982 0 C 1983 0 U 1984 0 U 1985 0 G 1986
0 C 1987 0 C 1988 0 G 1989 0 U 1996 0 A 1997 0 C
1999 0 C 2496 0 A 2497 0 C 2498 0 U 2499 0 C 2500
0 U 2527 0 U 2528 0 A 2553 0 U 2554 0 C 2555 0 G
2572 0 G 2573 0 G 2574 0 C 2575 0 A 2576 0 OMU
2587 0 OMG 2588 0 U 2589 0 U 2590 0 C 2591 0 G
2592 0 C 2593 0 G 2602 0 G 2603 0 A 2604 0 G 2638
0 G 2639 0 U 2640 0 A 2776 0 MG 8047 0 MG 8108 0
SR 9601 0 DC 74 4 DC 75 4 G 3088 9 C 3089 9 G
3090 9
23 1.25 2.65 237.9 -0.46 -0.56 8.1 84 5 6 4 9 2 2 0  A 708 0 A 721 0 C 910 0 G 911 0 A 913 0 A 914 0 C
915 0 A 929 0 C 930 0 C 931 0 U 932 0 C 933 0 C
934 0 G 935 0 C 936 0 C 937 0 G 938 0 A 943 0 U
1030 0 G 1031 0 A 1032 0 C 1033 0 G 1046 0 U 1047
0 G 1048 0 C 1049 0 C 1051 0 A 1058 0 G 1059 0 C
1060 0 C 1061 0 U 1062 0 G 1063 0 U 1064 0 G 1065
0 U 1066 0 A 1067 0 C 1126 0 C 1127 0 U 1128 0 C
1289 0 C 2493 0 G 2494 0 C 2498 0 U 2499 0 C 2500
0 G 2516 0 A 2517 0 C 2518 0 A 2521 0 G 2522 0 U
2523 0 C 2555 0 C 2556 0 U 2557 0 G 2558 0 C 2559
0 C 2560 0 A 2569 0 G 2570 0 C 2571 0 G 2572 0 G
2573 0 A 2694 0 C 2695 0 G 2696 0 A 2702 0 A 2703
0 C 2704 0 SR 9464 0 C 3091 9 G 3092 9 A 3093 9
SR 9481 9
24 2.38 2.38 241.5 -1.06 -0.78 12.2 77 8 8 1 1 1 2 0  C 31 0 G 32 0 G 33 0 C 34 0 U 35 0 G 50 0 C 62 0
U 63 0 C 85 0 A 86 0 C 87 0 A 151 0 A 174 0 U 176
0 A 177 0 G 213 0 U 214 0 G 223 0 U 224 0 G 225 0
C 440 0 A 441 0 A 442 0 C 443 0 G 458 0 A 459 0 C
461 0 A 462 0 G 464 0 G 479 0 C 480 0 U 488 0 G
499 0 G 500 0 G 501 0 A 502 0 G 503 0 A 509 0 U
510 0 G 512 0 A 513 0 G 514 0 U 647 0 G 648 0 U
649 0 C 650 0 U 651 0 G 652 0 G 739 0 G 740 0 C
741 0 G 742 0 C 757 0 A 758 0 C 759 0 G 1037 0 U
1338 0 A 1427 0 A 2356 0 U 2358 0 G 2359 0 C 2360
0 A 2361 0 A 2362 0 G 2363 0 A 2364 0 U 2384 0 G
2385 0 U 2386 0 U 2387 0 G 2397 0 A 2398 0 G 2399
0 G 2400 0 A 2401 0 U 2419 0 G 2420 0 G 2421 0 U
2422 0 C 2423 0 U 2424 0 G 2426 0 C 2427 0 SR
9432 0
25 1.20 1.43 242.3 -1.11 -0.66 13.4 81 11 4 5 3 1 1 0  A 466 0 G 467 0 A 476 0 U 488 0 G 499 0 G 500 0 G
501 0 A 502 0 G 503 0 A 509 0 U 510 0 G 512 0 A
513 0 G 514 0 U 845 0 U 1338 0 A 1427 0 C 1428 0
G 2099 0 A 2100 0 A 2103 0 C 2104 0 A 2474 0 C
2496 0 A 2497 0 C 2498 0 U 2527 0 U 2528 0 G 2529
0 A 2538 0 C 2555 0 C 2556 0 U 2557 0 G 2558 0 C
2559 0 C 2560 0 A 2569 0 G 2570 0 C 2571 0 G 2572
0 G 2573 0 U 2590 0 C 2591 0 G 2592 0 G 2602 0 G
2603 0 A 2604 0 UR3 2619 0 U 2620 0 PSU 2621 0 A
2637 0 C 2644 0 A 2694 0 C 2695 0 G 2696 0 A 2702
0 A 2703 0 C 2704 0 SR 9432 0 SR 9464 0 DC 74 4
DC 75 4 PPU 76 4
26 2.20 2.20 254.4 -0.86 -0.78 9.4 83 6 5 2 0 0 0 0  G 13 0 G 531 0 C 534 0 G 535 0 A 536 0 C 538 0 G
539 0 C 541 0 A 542 0 G 564 0 A 565 0 C 613 0 U
614 0 G 615 0 U 616 0 C 617 0 G 618 0 G 1076 0 G
1089 0 U 1091 0 A 1092 0 G 1093 0 C 1105 0 A 1106
0 G 1258 0 A 1259 0 G 1260 0 A 1261 0 C 1262 0 C
1263 0 U 1264 0 G 1265 0 U 1266 0 C 1267 0 U 1285
0 A 1286 0 A 1287 0 U 1383 0 C 1384 0 G 1385 0 A
1393 0 C 1394 0 C 1396 0 C 1397 0 G 1398 0 A 1399
0 C 1400 0 G 1401 0 G 1402 0 G 1556 0 G 1557 0 C
1558 0 A 1630 0 A 1716 0 C 1721 0 G 1727 0 G 1728
0 A 1729 0 A 2062 0 U 2063 0 U 2078 0 G 2079 0 C
2084 0 A 2085 0 C 2086 0 C 2087 0 C 2651 0 U 2652
0 A 2653 0 C 2654 0 U 2655 0 G 2657 0 G 2658 0 U
2659 0 G 2660 0 G 2662 0 U 2669 0 C 2737 0 A 2812
0 G 2829 0 U 2830 0 C 2831 0 C 2832 0 C 2833 0 C
2835 0 G 2842 0 A 2843 0 C 2844 0 G 2845 0
27 2.29 2.29 251.7 -0.88 -0.67 10.4 81 10 2 4 3 0 2 0  G 384 0 C 385 0 C 405 0 G 406 0 A 407 0 A 466 0 G
467 0 A 476 0 U 488 0 G 499 0 G 500 0 G 501 0 A
502 0 G 503 0 A 509 0 U 510 0 G 512 0 A 513 0 G
514 0 U 845 0 U 1338 0 A 1427 0 C 1428 0 A 1909 0
A 1910 0 C 1911 0 A 1912 0 C 1913 0 C 1914 0 C
1920 0 A 1921 0 A 1922 0 G 1923 0 A 1924 0 G 1925
0 G 1933 0 G 2099 0 A 2100 0 A 2103 0 C 2104 0 C
2105 0 C 2106 0 U 2117 0 C 2119 0 U 2120 0 G 2121
0 G 2267 0 C 2268 0 C 2269 0 G 2279 0 G 2285 0 G
2286 0 C 2287 0 G 2288 0 G 2289 0 A 2463 0 A 2469
0 A 2470 0 G 2471 0 C 2472 0 U 2473 0 A 2474 0 A
2538 0 U 2620 0 PSU 2621 0 C 2629 0 G 2630 0 G
2632 0 A 2635 0 C 2636 0 A 2637 0 C 2644 0 SR
9426 0 SR 9432 0 SR 9568 0
28 2.68 2.69 274.8 -0.82 -0.83 8.9 84 2 8 2 0 0 0 0  C 34 0 U 35 0 G 47 0 A 48 0 A 49 0 G 50 0 U 63 0
G 64 0 C 65 0 A 74 0 U 103 0 G 104 0 G 105 0 A
106 0 U 107 0 U 108 0 U 109 0 C 110 0 A 151 0 A
174 0 U 176 0 A 177 0 G 213 0 U 214 0 G 223 0 U
224 0 G 225 0 C 440 0 A 441 0 A 442 0 C 443 0 G
458 0 A 459 0 G 464 0 G 564 0 A 565 0 U 647 0 G
648 0 U 649 0 C 650 0 U 651 0 G 652 0 C 741 0 G
742 0 C 757 0 A 758 0 C 759 0 U 909 0 G 928 0 A
929 0 C 930 0 C 931 0 U 932 0 C 933 0 C 934 0 G
1031 0 A 1032 0 C 1033 0 G 1034 0 C 1035 0 G 1036
0 G 1037 0 G 1265 0 U 1266 0 C 1267 0 C 1268 0 G
1269 0 U 1270 0 A 1271 0 C 1272 0 U 1279 0 A 1280
0 C 1281 0 U 1282 0 G 1283 0 G 1284 0 U 1285 0 U
1298 0 G 1299 0 A 2395 0 C 2396 0 NA 9129 0
29 1.27 2.23 321.4 -1.04 -0.75 12.4 84 6 11 5 1 1 2 0  U 312 0 U 313 0 G 320 0 A 321 0 U 909 0 C 910 0 G
911 0 A 913 0 A 914 0 C 915 0 A 929 0 C 930 0 C
931 0 C 933 0 C 934 0 A 943 0 G 1031 0 A 1032 0 C
1033 0 G 1046 0 U 1047 0 G 1048 0 C 1049 0 C 1051
0 A 1058 0 G 1059 0 C 1060 0 C 1061 0 U 1062 0 G
1063 0 U 1064 0 G 1065 0 U 1066 0 A 1067 0 C 1126
0 C 1127 0 U 1128 0 A 1271 0 C 1272 0 U 1279 0 C
1289 0 U 1298 0 G 1299 0 G 1300 0 U 1309 0 U 1310
0 G 1311 0 G 1312 0 G 1315 0 U 1346 0 U 1347 0 A
1348 0 C 2493 0 G 2494 0 C 2498 0 U 2499 0 C 2500
0 G 2516 0 A 2517 0 C 2518 0 A 2521 0 G 2522 0 U
2523 0 C 2555 0 C 2556 0 U 2557 0 G 2558 0 C 2559
0 C 2560 0 A 2569 0 G 2570 0 C 2571 0 G 2572 0 G
2573 0 A 2694 0 C 2695 0 G 2696 0 A 2702 0 A 2703
0 C 2704 0 MG 8042 0 SR 9464 0 C 3091 9 G 3092 9
A 3093 9 SR 9481 9
30 2.11 2.11 344.3 -0.81 -0.79 9.2 89 3 10 4 2 0 0 0  C 34 0 U 35 0 G 47 0 A 48 0 A 49 0 G 50 0 U 63 0
G 64 0 C 65 0 A 74 0 U 103 0 G 104 0 G 105 0 A
106 0 U 107 0 U 108 0 U 109 0 C 110 0 A 151 0 A
174 0 U 176 0 A 177 0 G 213 0 U 214 0 G 223 0 U
224 0 G 225 0 C 440 0 A 441 0 A 442 0 C 443 0 G
458 0 A 459 0 G 464 0 U 647 0 G 648 0 U 649 0 C
650 0 U 651 0 G 652 0 C 741 0 G 742 0 C 757 0 A
758 0 C 759 0 A 913 0 A 914 0 C 915 0 G 928 0 A
929 0 C 930 0 C 931 0 U 932 0 A 943 0 G 956 0 C
1033 0 G 1034 0 C 1035 0 G 1036 0 G 1037 0 G 1046
0 U 1047 0 G 1048 0 C 1049 0 G 1050 0 C 1051 0 G
1052 0 G 1055 0 C 1060 0 C 1061 0 U 1062 0 G 1063
0 U 1064 0 G 1065 0 U 1066 0 A 1067 0 A 1133 0 G
1135 0 U 1136 0 G 1137 0 U 1141 0 C 1146 0 C 1153
0 A 1154 0 C 1208 0 U 1218 0 U 1219 0 U 1220 0 G
1221 0 A 1222 0 G 1223 0 G 1224 0 A 2395 0 C 2396
0 C 2787 0 NA 9129 0 NA 9152 0 SR 9413 0 A 3080 9
C 3081 9 G 3092 9 G 3094 9 C 3095 9 C 3096 9
31 1.43 1.43 31.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 1162 0 G 1163 0 U 1164 0 A 1166 0 G 1175 0 C
1176 0 G 1178 0 C 1179 0 U 1180 0 A 1181 0 C 1182
0 C 1183 0 C 1184 0 U 1185 0 G 1190 0 A 1191 0 A
1192 0 A 1193 0 A 1194 0
32 1.51 1.51 33.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 1158 0 G 1159 0 G 1160 0 A 1161 0 G 1162 0 U
1164 0 G 1165 0 A 1166 0 G 1175 0 C 1176 0 G 1178
0 C 1179 0 U 1180 0 A 1181 0 C 1182 0 A 1192 0 A
1193 0 A 1194 0 A 1202 0 G 1203 0 C 1204 0 U 1205
0
33 1.40 1.40 58.9 -0.86 -0.78 9.1 78 1 1 0 0 0 1 0  G 1162 0 G 1163 0 U 1164 0 G 1165 0 G 1167 0 C
1168 0 U 1170 0 G 1172 0 A 1173 0 A 1174 0 G 1175
0 C 1183 0 C 1184 0 U 1185 0 G 1190 0 A 1191 0 A
1192 0 A 1193 0 C 1201 0 A 1202 0 G 1203 0

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer