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PDBsum entry 1vql

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Top Page protein dna_rna metals Protein-protein interface(s) pores links
Pore analysis for: 1vql calculated with MOLE 2.0 PDB id
1vql
Pores calculated on whole structure Pores calculated excluding ligands

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33 pores, coloured by radius 33 pores, coloured by radius 33 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.19 3.19 54.0 -1.32 -0.82 13.2 80 3 3 1 0 0 0 0  G 2660 0 G 2668 0 U 2669 0 G 2670 0 A 2827 0 G
2828 0 G 2829 0 U 2830 0 C 2844 0 G 2845 0 C 2846
0 G 2847 0 G 2848 0 U 2849 0 C 2850 0 A 2910 0 C
2911 0 C 2912 0
2 2.67 2.67 92.3 -0.46 -0.67 3.3 50 0 0 0 0 1 0 0  C 699 0 U 701 0 G 702 0 G 703 0 C 704 0 G 720 0 A
721 0 G 722 0 G 723 0 G 724 0 C 725 0 C 741 0 G
742 0 G 743 0 G 744 0 C 910 0 G 911 0 G 928 0 A
929 0 C 930 0 C 931 0 U 932 0 C 933 0 G 1024 0 C
1026 0 G 1027 0 U 1030 0 G 1031 0 A 1032 0 C 1033
0 G 1034 0 C 1035 0 G 1036 0 G 1037 0 A 1287 0 U
1288 0 C 1289 0 A 2395 0 C 2396 0 SR 9433 0
3 2.05 2.21 117.7 -1.25 -0.78 9.1 87 5 3 8 0 0 3 0  U 2669 0 G 2670 0 U 2671 0 C 2672 0 U 2673 0 G
2674 0 C 2769 0 G 2770 0 G 2771 0 C 2804 0 A 2805
0 C 2806 0 G 2810 0 A 2811 0 A 2812 0 A 2827 0 G
2828 0 G 2829 0 U 2830 0 C 2844 0 G 2845 0 C 2846
0 G 2847 0 G 2848 0 U 2849 0 C 2850 0 SR 9462 0
4 2.40 2.40 123.1 -0.64 -0.79 5.3 68 0 2 1 0 1 1 0  G 739 0 G 740 0 C 741 0 C 910 0 G 911 0 G 928 0 A
929 0 C 930 0 C 931 0 U 932 0 C 933 0 G 1024 0 C
1026 0 G 1027 0 U 1030 0 G 1031 0 A 1032 0 C 1033
0 G 1034 0 C 1035 0 G 1036 0 G 1037 0 A 1287 0 U
1288 0 C 1289 0 A 2356 0 U 2358 0 G 2359 0 C 2360
0 A 2361 0 A 2362 0 G 2363 0 A 2364 0 U 2384 0 G
2385 0 U 2386 0 U 2387 0 A 2395 0 C 2396 0 G 2397
0 A 2398 0 G 2399 0 G 2400 0 A 2401 0 U 2419 0 G
2420 0 G 2421 0 U 2422 0 C 2423 0 U 2424 0 G 2426
0 C 2427 0
5 2.19 2.34 133.5 -1.41 -0.80 10.9 87 4 6 9 0 0 3 0  U 2659 0 G 2660 0 G 2662 0 G 2668 0 U 2669 0 G
2670 0 U 2671 0 C 2672 0 U 2673 0 G 2674 0 C 2769
0 G 2770 0 G 2771 0 C 2804 0 A 2805 0 C 2806 0 G
2810 0 A 2811 0 A 2812 0 G 2829 0 U 2830 0 C 2844
0 A 2910 0 C 2911 0 C 2912 0 SR 9462 0
6 1.24 1.69 163.1 -1.21 -0.52 20.8 84 11 13 2 11 0 0 0  C 31 0 C 87 0 U 335 0 G 336 0 C 461 0 A 462 0 G
479 0 C 480 0 U 481 0 G 482 0 A 484 0 A 495 0 G
496 0 A 498 0 G 499 0 G 514 0 A 1390 0 G 1391 0 A
1392 0 A 1427 0 A 1434 0 G 1727 0 C 2831 0 C 2833
0 A 2908 0 G 2909 0 A 2910 0
7 1.96 2.20 172.3 -0.51 -0.76 4.7 91 1 1 1 1 0 1 0  G 911 0 A 913 0 A 914 0 C 915 0 A 929 0 C 930 0 C
931 0 A 943 0 G 1024 0 C 1026 0 G 1027 0 U 1030 0
G 1031 0 A 1032 0 C 1033 0 G 1046 0 U 1047 0 G
1048 0 C 1049 0 C 1051 0 A 1058 0 G 1059 0 C 1060
0 C 1061 0 U 1062 0 G 1063 0 U 1064 0 G 1065 0 U
1066 0 A 1067 0 C 1126 0 C 1127 0 U 1128 0 A 1287
0 U 1288 0 C 1289 0 C 2493 0 G 2494 0 C 2498 0 U
2499 0 C 2500 0 G 2516 0 A 2517 0 C 2518 0 A 2521
0 G 2522 0 U 2523 0 C 2555 0 C 2556 0 U 2557 0 C
2560 0 C 2561 0 G 2562 0 U 2563 0 C 2565 0 A 2569
0 G 2570 0 C 2571 0 G 2572 0 G 2573 0 MG 8068 0
SR 9464 0 C 3091 9 G 3092 9 A 3093 9 SR 9481 9
8 1.51 1.51 192.8 -1.53 -0.69 19.2 81 11 11 1 4 1 0 0  C 29 0 C 31 0 C 87 0 G 307 0 U 308 0 C 309 0 C
318 0 A 319 0 G 320 0 G 324 0 C 330 0 G 332 0 G
333 0 G 334 0 U 335 0 A 337 0 C 338 0 A 339 0 A
340 0 C 341 0 C 461 0 A 462 0 G 479 0 C 480 0 U
481 0 G 482 0 C 483 0 A 484 0 A 495 0 G 496 0 A
498 0 G 499 0 G 514 0 C 1342 0 A 1390 0 G 1391 0
A 1392 0 A 1427 0 A 1434 0 G 1727 0 C 2831 0 C
2833 0 A 2908 0 G 2909 0 A 2910 0
9 1.36 1.36 196.2 -0.83 -0.74 7.3 82 3 3 4 1 1 2 1  G 41 0 C 42 0 U 43 0 A 49 0 G 64 0 C 65 0 C 101 0
A 102 0 U 103 0 G 104 0 C 136 0 U 137 0 U 138 0 G
142 0 C 143 0 A 144 0 A 145 0 G 185 0 C 252 0 U
253 0 A 255 0 G 258 0 G 289 0 C 300 0 G 301 0 G
307 0 U 308 0 C 309 0 C 318 0 A 319 0 G 320 0 G
324 0 C 330 0 A 331 0 G 332 0 C 338 0 A 339 0 A
340 0 C 341 0 U 346 0 A 347 0 A 354 0 C 355 0 G
358 0 C 443 0 C 444 0 U 445 0 G 446 0 A 447 0 U
673 0 A 1307 0
10 1.49 1.49 194.7 -0.83 -0.73 8.6 77 2 5 0 0 2 0 0  A 37 0 G 38 0 C 208 0 G 209 0 G 213 0 U 214 0 G
223 0 U 224 0 G 225 0 C 298 0 G 307 0 U 308 0 C
309 0 C 318 0 A 319 0 G 320 0 G 324 0 C 330 0 A
331 0 G 332 0 C 338 0 A 339 0 A 340 0 C 341 0 A
347 0 C 440 0 G 446 0 A 447 0 U 647 0 G 648 0 U
649 0 C 650 0 U 651 0 G 652 0 A 666 0 C 667 0 C
668 0 A 671 0 U 673 0 A 674 0 U 675 0 A 686 0 G
690 0 U 701 0 G 702 0 G 703 0 C 704 0 G 720 0 A
721 0 G 722 0 G 723 0 G 724 0 G 742 0 G 743 0 G
744 0 C 757 0 A 758 0 C 759 0 G 1036 0 A 1307 0
SR 9433 0 NA 9104 C
11 2.29 2.30 206.5 -0.53 -0.78 4.4 90 2 1 1 0 0 1 0  G 911 0 C 930 0 C 931 0 A 943 0 G 944 0 U 945 0 C
946 0 U 947 0 G 948 0 U 949 0 G 950 0 G 960 0 A
1012 0 A 1013 0 A 1014 0 C 1015 0 U 1017 0 A 1018
0 C 1019 0 G 1024 0 C 1026 0 G 1027 0 U 1030 0 G
1031 0 A 1032 0 C 1033 0 A 1287 0 U 1288 0 C 1289
0 C 2351 0 G 2352 0 C 2393 0 U 3001 9 C 3012 9 G
3014 9 C 3015 9 G 3016 9 G 3017 9 G 3058 9 C 3059
9 C 3060 9 C 3061 9 A 3062 9 C 3063 9 C 3067 9 G
3068 9 U 3069 9 U 3070 9 C 3071 9 C 3072 9 G 3102
9 A 3103 9 A 3104 9 A 3105 9 C 3106 9 C 3107 9 C
3108 9 G 3110 9 U 3111 9 U 3112 9 C 3113 9 G 3114
9 C 3115 9 C 3116 9
12 2.00 2.00 212.6 -0.81 -0.78 8.5 84 4 5 0 0 0 1 0  G 911 0 A 913 0 A 914 0 C 915 0 A 929 0 C 930 0 C
931 0 A 943 0 G 1024 0 C 1026 0 G 1027 0 U 1030 0
G 1031 0 A 1032 0 C 1033 0 G 1046 0 U 1047 0 G
1048 0 C 1049 0 C 1051 0 A 1058 0 G 1059 0 C 1060
0 C 1061 0 U 1062 0 G 1063 0 U 1064 0 G 1065 0 U
1066 0 A 1067 0 U 1120 0 C 1126 0 C 1127 0 U 1128
0 C 1129 0 U 1130 0 G 1131 0 A 1231 0 A 1232 0 G
1235 0 A 1236 0 U 1237 0 C 1238 0 A 1287 0 U 1288
0 C 1289 0 G 2068 0 A 2083 0 C 2084 0 U 2492 0 C
2493 0 G 2524 0 G 2525 0 U 2550 0 C 2551 0 C 2552
0 A 2577 0 G 2578 0 U 2655 0 G 2657 0 G 2658 0 U
2659 0 U 2669 0 G 2670 0 A 2677 0 A 2678 0 G 2679
0 G 2809 0 A 2812 0 A 2827 0 G 2828 0 G 2829 0 U
2830 0 C 2844 0 G 2845 0 C 2846 0 G 2847 0 G 2848
0 U 2849 0 C 2850 0 MG 8025 0 C 3091 9 G 3092 9 A
3093 9
13 1.22 1.81 219.9 -0.71 -0.64 11.6 84 6 10 2 8 0 0 0  C 31 0 G 33 0 C 34 0 U 35 0 G 50 0 C 62 0 U 63 0
C 85 0 A 86 0 C 87 0 A 151 0 A 174 0 U 176 0 A
177 0 C 208 0 G 213 0 U 214 0 G 223 0 U 224 0 G
225 0 U 335 0 G 336 0 C 440 0 A 441 0 A 442 0 C
443 0 G 458 0 A 459 0 C 461 0 A 463 0 G 464 0 A
484 0 U 647 0 G 648 0 U 649 0 C 650 0 U 651 0 G
652 0 C 741 0 G 742 0 C 757 0 A 758 0 C 759 0 C
910 0 G 911 0 G 928 0 A 929 0 C 930 0 C 931 0 U
932 0 C 933 0 G 1024 0 C 1026 0 G 1027 0 U 1030 0
G 1031 0 A 1032 0 C 1033 0 G 1034 0 C 1035 0 G
1036 0 G 1037 0 A 1287 0 U 1288 0 C 1289 0 A 2395
0 C 2396 0
14 1.35 2.55 223.9 -0.73 -0.55 11.2 86 11 4 5 10 0 0 0  C 31 0 C 87 0 U 335 0 G 336 0 C 461 0 A 462 0 A
466 0 G 467 0 A 476 0 G 479 0 C 480 0 U 481 0 G
482 0 A 484 0 G 514 0 U 825 0 G 828 0 U 831 0 C
839 0 U 845 0 A 846 0 C 847 0 C 848 0 C 849 0 U
850 0 G 1378 0 A 1379 0 U 1405 0 A 1406 0 A 1407
0 A 1427 0 C 1428 0 G 1546 0 A 1547 0 U 1548 0 A
1550 0 A 1637 0 U 1638 0 U 1639 0 G 1703 0 G 1704
0 G 1706 0 G 1707 0 A 1710 0 A 1711 0 A 1712 0 G
1713 0 C 1714 0 A 1796 0 A 1797 0 C 1798 0 G 1799
0 G 1837 0 U 1838 0 G 2099 0 A 2100 0 A 2103 0 C
2644 0 G 2646 0 NA 9136 0 SR 9445 0
15 1.36 1.36 222.2 -0.81 -0.75 9.2 80 3 6 1 1 1 0 0  A 37 0 G 38 0 C 208 0 G 209 0 G 213 0 U 214 0 G
223 0 U 224 0 G 225 0 C 298 0 G 307 0 U 308 0 C
309 0 C 318 0 A 319 0 G 320 0 G 324 0 C 330 0 A
331 0 G 332 0 C 338 0 A 339 0 A 340 0 C 341 0 A
347 0 C 440 0 G 446 0 A 447 0 U 647 0 G 648 0 U
649 0 C 650 0 U 651 0 G 652 0 A 666 0 C 667 0 C
668 0 A 671 0 U 673 0 A 674 0 U 675 0 C 741 0 G
742 0 C 757 0 A 758 0 C 759 0 C 910 0 G 911 0 G
928 0 A 929 0 C 930 0 C 931 0 U 932 0 C 933 0 G
1024 0 C 1026 0 G 1027 0 U 1030 0 G 1031 0 A 1032
0 C 1033 0 G 1034 0 C 1035 0 G 1036 0 G 1037 0 A
1287 0 U 1288 0 C 1289 0 A 1307 0 A 2395 0 C 2396
0 NA 9104 C
16 1.30 2.65 223.3 -0.77 -0.65 12.2 82 5 10 2 7 1 1 0  C 31 0 G 33 0 C 34 0 U 35 0 G 50 0 C 62 0 U 63 0
C 85 0 A 86 0 C 87 0 A 151 0 C 153 0 A 174 0 U
176 0 A 177 0 C 208 0 G 213 0 U 214 0 G 223 0 U
224 0 G 225 0 U 335 0 G 336 0 C 440 0 A 441 0 A
442 0 C 443 0 G 458 0 A 459 0 C 461 0 A 463 0 G
464 0 A 484 0 U 647 0 G 648 0 U 649 0 C 650 0 U
651 0 G 652 0 G 739 0 G 740 0 C 741 0 G 742 0 C
757 0 A 758 0 C 759 0 G 1037 0 A 2356 0 U 2358 0
G 2359 0 C 2360 0 A 2361 0 A 2362 0 G 2363 0 A
2364 0 U 2384 0 G 2385 0 U 2386 0 U 2387 0 G 2397
0 A 2398 0 G 2399 0 G 2400 0 A 2401 0 U 2419 0 G
2420 0 G 2421 0 U 2422 0 C 2423 0 U 2424 0 G 2426
0 C 2427 0
17 2.67 2.67 221.6 -1.00 -0.79 8.9 85 4 6 7 0 0 3 0  G 911 0 A 913 0 A 914 0 C 915 0 A 929 0 C 930 0 C
931 0 A 943 0 G 1024 0 C 1026 0 G 1027 0 U 1030 0
G 1031 0 A 1032 0 C 1033 0 G 1046 0 U 1047 0 G
1048 0 C 1049 0 C 1051 0 A 1058 0 G 1059 0 C 1060
0 C 1061 0 U 1062 0 G 1063 0 U 1064 0 G 1065 0 U
1066 0 A 1067 0 U 1120 0 C 1126 0 C 1127 0 U 1128
0 C 1129 0 U 1130 0 G 1131 0 A 1231 0 A 1232 0 A
1236 0 U 1237 0 C 1238 0 A 1287 0 U 1288 0 C 1289
0 G 2068 0 U 2492 0 C 2493 0 G 2524 0 G 2525 0 C
2551 0 C 2552 0 A 2577 0 G 2578 0 G 2674 0 A 2675
0 C 2676 0 A 2677 0 A 2678 0 G 2679 0 A 2680 0 C
2769 0 G 2770 0 G 2771 0 C 2802 0 C 2803 0 C 2804
0 A 2805 0 C 2806 0 U 2808 0 MG 8025 0 SR 9462 0
C 3091 9 G 3092 9 A 3093 9
18 1.45 1.45 225.6 -0.94 -0.78 10.0 76 2 6 1 0 2 1 0  A 37 0 G 38 0 C 208 0 G 209 0 G 213 0 U 214 0 G
223 0 U 224 0 G 225 0 C 298 0 G 307 0 U 308 0 C
309 0 C 318 0 A 319 0 G 320 0 G 324 0 C 330 0 A
331 0 G 332 0 C 338 0 A 339 0 A 340 0 C 341 0 A
347 0 C 440 0 G 446 0 A 447 0 U 647 0 G 648 0 U
649 0 C 650 0 U 651 0 G 652 0 A 666 0 C 667 0 C
668 0 A 671 0 U 673 0 A 674 0 U 675 0 G 739 0 G
740 0 C 741 0 G 742 0 C 757 0 A 758 0 C 759 0 G
1037 0 A 1307 0 A 2356 0 U 2358 0 G 2359 0 C 2360
0 A 2361 0 A 2362 0 G 2363 0 A 2364 0 U 2384 0 G
2385 0 U 2386 0 U 2387 0 G 2397 0 A 2398 0 G 2399
0 G 2400 0 A 2401 0 U 2419 0 G 2420 0 G 2421 0 U
2422 0 C 2423 0 U 2424 0 G 2426 0 C 2427 0 NA
9104 C
19 2.13 2.11 229.7 -0.90 -0.78 9.4 84 5 5 1 1 0 1 0  G 958 0 C 959 0 G 960 0 A 961 0 C 962 0 C 963 0 G
964 0 C 1000 0 U 1001 0 G 1002 0 U 1003 0 U 1120
0 G 1121 0 G 1131 0 A 1132 0 A 1133 0 G 1224 0 C
1225 0 G 1226 0 C 1227 0 C 1228 0 A 1230 0 A 1231
0 A 1232 0 G 1235 0 A 1236 0 C 1238 0 A 2083 0 C
2084 0 A 2354 0 G 2355 0 A 2356 0 G 2363 0 U 2550
0 C 2551 0 C 2552 0 A 2577 0 G 2578 0 U 2655 0 G
2657 0 G 2658 0 U 2659 0 U 2669 0 G 2670 0 A 2677
0 A 2678 0 G 2679 0 G 2809 0 A 2812 0 A 2827 0 G
2828 0 G 2829 0 U 2830 0 C 2844 0 G 2845 0 C 2846
0 G 2847 0 G 2848 0 U 2849 0 C 2850 0 MG 8025 0 C
3067 9 G 3068 9 A 3077 9 U 3079 9 A 3080 9 G 3090
9 C 3091 9 G 3092 9 C 3095 9 C 3096 9 A 3105 9 C
3106 9 C 3107 9 C 3108 9
20 1.46 1.46 248.1 -1.35 -0.73 16.3 82 9 11 4 5 0 1 1  C 31 0 G 41 0 C 42 0 U 43 0 A 49 0 C 62 0 U 63 0
G 64 0 C 65 0 C 85 0 A 86 0 C 87 0 A 102 0 U 103
0 G 104 0 C 136 0 U 137 0 U 138 0 G 142 0 C 143 0
A 144 0 A 145 0 G 185 0 C 252 0 U 253 0 A 255 0 G
258 0 G 289 0 A 354 0 C 355 0 G 358 0 C 443 0 C
444 0 C 461 0 A 462 0 G 479 0 C 480 0 A 495 0 G
496 0 A 498 0 G 499 0 G 514 0 A 1390 0 G 1391 0 A
1392 0 A 1427 0 A 1434 0 G 1727 0 C 2831 0 C 2833
0 A 2908 0 G 2909 0 A 2910 0 C 2911 0
21 1.35 2.57 253.1 -0.66 -0.63 10.1 88 11 7 5 9 0 0 0  C 31 0 C 87 0 U 335 0 G 336 0 C 461 0 A 462 0 G
479 0 C 480 0 U 481 0 G 482 0 A 484 0 A 495 0 G
496 0 A 497 0 A 498 0 G 514 0 G 787 0 U 1388 0 G
1389 0 A 1390 0 G 1410 0 A 1411 0 C 1421 0 U 1422
0 C 1423 0 A 1424 0 G 1425 0 C 1426 0 A 1427 0 C
1436 0 A 1437 0 G 1438 0 U 1488 0 G 1489 0 G 1490
0 G 1496 0 G 1497 0 U 1505 0 C 1534 0 G 1535 0 C
1536 0 A 1581 0 C 1582 0 U 1583 0 G 1595 0 U 1596
0 G 1600 0 G 1601 0 A 1607 0 G 1608 0 C 1617 0 A
1642 0 C 1643 0 C 1644 0 U 1645 0 G 1646 0 G 1647
0 G 1648 0 G 1649 0 C 1680 0 A 1685 0 C 1699 0 C
1700 0 G 1719 0 C 1720 0 MG 8082 0
22 1.50 1.69 257.8 -1.05 -0.70 12.9 81 5 9 2 3 3 1 0  A 191 0 A 192 0 A 234 0 C 235 0 A 236 0 G 237 0 C
238 0 C 271 0 A 272 0 A 285 0 U 286 0 C 294 0 C
295 0 G 296 0 U 297 0 C 298 0 G 307 0 U 308 0 C
309 0 C 318 0 A 319 0 G 320 0 G 324 0 C 330 0 A
331 0 G 332 0 C 338 0 A 339 0 A 340 0 C 341 0 A
347 0 C 348 0 U 349 0 C 356 0 A 360 0 C 361 0 A
378 0 G 379 0 A 408 0 U 409 0 A 410 0 G 428 0 A
429 0 A 430 0 G 446 0 A 447 0 G 669 0 G 670 0 A
671 0 G 672 0 U 673 0 A 1307 0 SR 9509 0
23 1.33 1.33 253.6 -1.06 -0.68 10.7 84 11 2 4 3 1 0 0  C 29 0 C 31 0 C 87 0 G 307 0 U 308 0 C 309 0 C
318 0 A 319 0 G 320 0 G 324 0 C 330 0 G 332 0 G
333 0 G 334 0 U 335 0 A 337 0 C 338 0 A 339 0 A
340 0 C 341 0 C 461 0 A 462 0 A 466 0 G 467 0 A
476 0 G 479 0 C 480 0 U 481 0 G 482 0 C 483 0 A
484 0 G 514 0 U 825 0 G 828 0 U 831 0 C 839 0 U
845 0 A 846 0 C 847 0 C 848 0 C 849 0 U 850 0 C
1342 0 G 1378 0 A 1379 0 U 1405 0 A 1406 0 A 1407
0 A 1427 0 C 1428 0 G 1546 0 A 1547 0 U 1548 0 A
1550 0 A 1637 0 U 1638 0 U 1639 0 G 1703 0 G 1704
0 G 1706 0 G 1707 0 A 1710 0 A 1711 0 A 1712 0 G
1713 0 C 1714 0 A 1796 0 A 1797 0 C 1798 0 G 1799
0 G 1837 0 U 1838 0 G 2099 0 A 2100 0 A 2103 0 C
2644 0 G 2646 0 NA 9136 0 SR 9445 0
24 1.26 1.26 259.3 -0.96 -0.73 10.5 85 9 9 6 2 1 1 1  G 41 0 C 42 0 U 43 0 A 49 0 G 64 0 C 65 0 C 101 0
A 102 0 U 103 0 G 104 0 G 185 0 C 240 0 A 241 0 A
242 0 A 243 0 C 244 0 C 245 0 G 246 0 A 247 0 A
248 0 C 250 0 G 264 0 U 265 0 G 266 0 G 267 0 U
268 0 G 269 0 C 287 0 A 288 0 G 289 0 C 290 0 C
300 0 G 301 0 G 307 0 U 308 0 C 309 0 C 318 0 A
319 0 G 320 0 G 324 0 C 330 0 A 331 0 G 332 0 C
338 0 A 339 0 A 340 0 C 341 0 U 346 0 A 347 0 A
354 0 C 355 0 G 358 0 C 443 0 C 444 0 U 445 0 G
446 0 A 447 0 U 673 0 A 1307 0 MG 8027 0
25 1.29 2.14 271.0 -0.77 -0.60 13.0 84 7 13 3 11 2 1 0  G 41 0 C 42 0 U 43 0 A 49 0 U 63 0 G 64 0 C 65 0
G 84 0 C 85 0 A 86 0 C 87 0 C 101 0 A 102 0 U 103
0 G 104 0 G 185 0 A 191 0 A 192 0 A 236 0 G 237 0
C 238 0 C 271 0 A 272 0 A 285 0 U 286 0 C 287 0 A
288 0 U 335 0 G 336 0 A 354 0 C 355 0 G 358 0 U
359 0 A 360 0 C 361 0 A 378 0 G 379 0 A 408 0 U
409 0 A 410 0 G 428 0 A 429 0 A 430 0 U 434 0 A
435 0 C 443 0 C 444 0 A 484 0 SR 9509 0
26 1.29 1.69 269.6 -0.73 -0.56 10.9 87 11 4 5 11 0 0 0  C 31 0 C 87 0 U 335 0 G 336 0 C 461 0 A 462 0 A
466 0 G 467 0 A 476 0 G 479 0 C 480 0 U 481 0 G
482 0 A 484 0 G 514 0 U 845 0 A 1427 0 C 1428 0 G
2099 0 A 2100 0 A 2103 0 U 2495 0 C 2496 0 A 2497
0 C 2498 0 U 2527 0 U 2528 0 G 2529 0 G 2540 0 C
2555 0 C 2556 0 U 2557 0 C 2560 0 C 2561 0 G 2562
0 U 2563 0 C 2565 0 A 2569 0 G 2570 0 C 2571 0 G
2572 0 G 2573 0 C 2591 0 G 2592 0 G 2602 0 G 2603
0 A 2604 0 G 2616 0 G 2618 0 UR3 2619 0 U 2620 0
A 2637 0 G 2638 0 G 2639 0 G 2643 0 C 2644 0 U
2645 0 G 2646 0 MG 8068 0 SR 9464 0 SR 9530 0 DC
74 4 DC 75 4 PPU 76 4
27 2.81 2.81 269.8 -1.32 -0.73 16.6 80 10 16 1 4 1 0 0  C 31 0 G 33 0 C 34 0 U 35 0 G 50 0 C 62 0 U 63 0
C 85 0 A 86 0 C 87 0 A 151 0 A 174 0 U 176 0 A
177 0 C 208 0 G 213 0 U 214 0 G 223 0 U 224 0 G
225 0 C 440 0 A 441 0 A 442 0 C 443 0 G 458 0 A
459 0 C 461 0 A 462 0 A 463 0 G 464 0 G 479 0 C
480 0 A 495 0 G 496 0 A 498 0 G 499 0 G 514 0 U
647 0 G 648 0 U 649 0 C 650 0 U 651 0 G 652 0 A
686 0 G 690 0 U 701 0 G 702 0 G 703 0 C 704 0 G
720 0 A 721 0 G 722 0 G 723 0 G 724 0 G 742 0 G
743 0 G 744 0 C 757 0 A 758 0 C 759 0 G 1036 0 A
1390 0 G 1391 0 A 1392 0 A 1427 0 A 1434 0 G 1727
0 C 2831 0 C 2832 0 C 2833 0 A 2908 0 G 2909 0 A
2910 0 C 2911 0 SR 9433 0
28 1.56 1.56 279.9 -0.82 -0.74 7.9 81 5 4 4 1 2 1 0  G 47 0 A 48 0 A 49 0 G 64 0 C 65 0 C 101 0 A 102
0 U 103 0 G 104 0 G 105 0 U 107 0 U 108 0 U 109 0
C 110 0 C 111 0 A 114 0 G 116 0 C 124 0 U 125 0 A
128 0 A 129 0 C 300 0 G 301 0 G 307 0 U 308 0 C
309 0 C 318 0 A 319 0 G 320 0 G 324 0 C 330 0 A
331 0 G 332 0 C 338 0 A 339 0 A 340 0 C 341 0 U
346 0 A 347 0 C 443 0 C 444 0 U 445 0 G 446 0 A
447 0 U 673 0 A 1307 0 G 1449 0 U 1511 0 G 1512 0
C 1513 0 C 1514 0 A 1515 0 G 1576 0 U 1577 0 C
1578 0 C 1579 0 A 1580 0 A 1581 0 G 1608 0 C 1609
0 G 1610 0 G 1611 0 A 1612 0 C 1613 0 G 1614 0 A
1615 0 G 1663 0 G 1665 0 C 1666 0 A 1667 0 U 1668
0 A 1669 0 G 1670 0 U 1671 0 G 1672 0 U 1673 0 NA
9129 0
29 2.09 2.06 296.8 -0.97 -0.79 9.7 84 6 9 3 1 0 2 0  G 958 0 C 959 0 G 960 0 C 1000 0 U 1001 0 G 1002
0 U 1003 0 U 1120 0 G 1121 0 G 1131 0 A 1132 0 A
1133 0 G 1224 0 C 1225 0 G 1226 0 C 1227 0 C 1228
0 A 1230 0 A 1231 0 A 1232 0 G 1235 0 A 1236 0 C
1238 0 A 2083 0 C 2084 0 C 2351 0 G 2352 0 U 2550
0 C 2551 0 C 2552 0 A 2577 0 G 2578 0 U 2655 0 G
2657 0 G 2658 0 U 2659 0 G 2660 0 G 2662 0 G 2668
0 U 2669 0 A 2677 0 A 2678 0 G 2679 0 G 2809 0 A
2812 0 G 2829 0 U 2830 0 C 2844 0 A 2910 0 C 2911
0 C 2912 0 MG 8025 0 U 3001 9 C 3012 9 G 3014 9 C
3015 9 G 3016 9 G 3017 9 G 3058 9 C 3059 9 C 3060
9 C 3061 9 A 3062 9 C 3063 9 C 3067 9 G 3068 9 A
3077 9 U 3079 9 A 3080 9 G 3090 9 C 3091 9 G 3092
9 C 3095 9 C 3096 9 A 3105 9 C 3106 9 C 3107 9 C
3108 9 U 3111 9 U 3112 9 C 3113 9 G 3114 9 C 3115
9 C 3116 9
30 1.17 1.16 311.2 -1.38 -0.72 17.2 84 15 17 6 6 0 0 1  C 31 0 G 41 0 C 42 0 U 43 0 A 49 0 C 62 0 U 63 0
G 64 0 C 65 0 C 85 0 A 86 0 C 87 0 A 102 0 U 103
0 G 104 0 G 185 0 C 240 0 A 241 0 A 242 0 A 243 0
C 244 0 C 245 0 G 246 0 A 247 0 A 248 0 C 250 0 G
264 0 U 265 0 G 266 0 G 267 0 U 268 0 G 269 0 C
287 0 A 288 0 G 289 0 C 290 0 A 354 0 C 355 0 G
358 0 C 443 0 C 444 0 C 461 0 A 462 0 G 479 0 C
480 0 A 495 0 G 496 0 A 498 0 G 499 0 G 514 0 A
1390 0 G 1391 0 A 1392 0 A 1427 0 A 1434 0 G 1727
0 C 2831 0 C 2832 0 C 2833 0 A 2908 0 G 2909 0 A
2910 0 C 2911 0 MG 8027 0 SR 9532 0
31 1.47 1.47 29.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 1162 0 G 1163 0 U 1164 0 A 1166 0 G 1175 0 C
1176 0 G 1178 0 C 1179 0 U 1180 0 A 1181 0 C 1183
0 C 1184 0 U 1185 0 G 1190 0 A 1191 0 A 1192 0 A
1193 0 A 1194 0 G 1195 0 C 1196 0 A 2509 0
32 1.35 1.35 32.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 1162 0 G 1163 0 U 1164 0 G 1165 0 A 1174 0 G
1175 0 C 1183 0 C 1184 0 U 1185 0 G 1190 0 A 1191
0 A 1192 0 A 1193 0 C 1201 0 A 1202 0
33 1.14 1.14 52.3 -0.61 -0.78 5.4 67 0 1 0 0 0 1 0  G 1165 0 A 1166 0 G 1167 0 A 1173 0 A 1174 0 C
1176 0 G 1178 0 C 1179 0 U 1180 0 A 1181 0 A 1193
0 A 1194 0 G 1195 0 C 1196 0 A 2509 0

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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