PDBsum entry 1vos Go to PDB code:  Tunnel analysis for: 1vos calculated with MOLE 2.0 PDB id 1vos Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   29 tunnels, coloured by tunnel radius 29 tunnels, coloured by tunnel radius 29 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 1.71 48.9 0.46 0.06 8.4 85 2 2 1 11 1 1 0  G 9 A A 10 A G 558 A A 559 A 2 1.43 1.43 54.6 -1.28 -0.54 14.5 79 4 1 0 2 1 0 0  A 975 A A 977 A A 978 A C 979 A C 1006 A C 1007 A A 1016 A G 1017 A C 1037 A C 1218 A U 1219 A A 1318 A U 1358 A C 1359 A A 1360 A G 1361 A 3 1.53 1.53 55.2 -0.57 -0.62 4.8 77 1 0 0 1 1 0 0  A 975 A A 977 A A 978 A C 979 A C 980 A U 981 A A 983 A C 984 A C 985 A A 986 A G 987 A C 1214 A G 1216 A C 1218 A U 1219 A G 1220 A G 1221 A A 1318 A U 1358 A C 1359 A A 1360 A G 1361 A 4 1.42 1.47 56.9 -0.96 -0.44 9.2 76 3 1 0 0 1 0 0  U 1065 A A 1110 A A 1111 A C 1112 A G 1154 A G 1155 A G 1156 A C 1158 A A 1183 A G 1184 A G 1186 A G 1187 A A 1188 A C 1189 A G 1190 A C 1367 A G 1368 A 5 1.43 1.47 57.2 -1.18 -0.54 13.4 81 6 2 0 1 1 0 0  G 933 A C 934 A U 1065 A C 1172 A G 1173 A G 1182 A A 1183 A G 1185 A G 1186 A G 1187 A A 1188 A G 1190 A U 1345 A A 1346 A C 1367 A G 1368 A 6 1.44 1.52 59.6 -1.24 -0.56 13.0 83 6 3 1 1 1 0 0  G 933 A C 934 A U 1065 A G 1174 A G 1175 A G 1177 A G 1181 A G 1182 A A 1183 A G 1185 A G 1186 A G 1187 A A 1188 A G 1190 A U 1345 A A 1346 A C 1367 A G 1368 A 7 1.14 1.78 66.8 0.23 -0.04 7.3 82 2 3 1 9 2 2 0  G 9 A A 10 A G 558 A A 559 A G 858 A A 859 A A 860 A U 863 A C 866 A C 1076 A G 1077 A U 1078 A 8 1.37 1.37 67.5 -0.94 -0.21 15.9 79 11 1 1 2 2 0 0  G 1057 A G 1058 A C 1059 A C 1060 A G 1061 A U 1062 A A 1188 A G 1190 A C 1203 A A 1204 A U 1205 A C 1367 A G 1368 A 9 1.42 1.47 70.0 -1.14 -0.44 9.7 75 5 1 2 1 3 0 0  A 935 A G 966 A C 967 A A 968 A U 1065 A G 1187 A A 1188 A G 1190 A A 1340 A U 1341 A C 1342 A G 1343 A C 1344 A C 1367 A G 1368 A C 1383 A C 1384 A 10 1.20 1.20 70.8 -0.67 -0.33 8.1 84 5 1 1 2 2 0 0  G 945 A A 946 A C 967 A A 968 A U 1065 A G 1187 A A 1188 A G 1190 A C 1230 A G 1231 A G 1338 A A 1339 A A 1340 A U 1341 A C 1342 A G 1343 A C 1344 A C 1367 A G 1368 A 11 1.42 1.44 90.5 -1.01 -0.44 11.2 67 8 1 0 2 4 0 0  G 926 A G 928 A G 929 A A 935 A G 966 A C 967 A A 968 A U 1065 A G 1187 A A 1188 A G 1190 A C 1342 A G 1343 A C 1344 A C 1367 A G 1368 A U 1381 A C 1382 A C 1383 A C 1384 A C 1533 A 12 1.41 1.42 93.6 -1.45 -0.42 15.4 78 9 2 0 1 2 1 0  G 942 A U 943 A G 944 A A 946 A G 947 A C 948 A U 1065 A G 1187 A A 1188 A G 1190 A C 1226 A A 1227 A C 1228 A A 1229 A C 1230 A G 1231 A U 1232 A G 1233 A C 1234 A C 1344 A C 1366 A C 1367 A G 1368 A 13 1.46 1.47 93.2 -1.16 -0.47 12.2 75 8 2 0 1 2 1 0  U 1065 A G 1187 A A 1188 A G 1190 A C 1234 A U 1235 A C 1244 A A 1245 A C 1267 A A 1268 A A 1269 A A 1286 A A 1288 A A 1289 A C 1325 A C 1326 A C 1344 A G 1353 A C 1354 A U 1364 A G 1365 A C 1366 A C 1367 A G 1368 A C 1369 A 14 1.41 1.42 96.5 -0.96 -0.48 10.1 73 7 1 1 2 2 0 0  G 791 A A 792 A U 793 A G 926 A A 935 A G 966 A C 967 A A 968 A U 1065 A G 1187 A A 1188 A G 1190 A C 1342 A G 1343 A C 1344 A C 1367 A G 1368 A C 1383 A C 1384 A G 1497 A U 1498 A A 1499 A G 1505 A G 1517 A A 1518 A A 1519 A 15 1.41 1.45 98.0 -1.17 -0.48 12.2 77 8 2 0 1 2 1 0  U 1065 A G 1187 A A 1188 A G 1190 A C 1234 A U 1235 A C 1243 A U 1301 A U 1302 A C 1303 A G 1305 A C 1325 A C 1326 A C 1327 A U 1330 A G 1331 A C 1344 A G 1353 A C 1354 A U 1364 A G 1365 A C 1366 A C 1367 A G 1368 A C 1369 A 16 1.41 1.45 99.9 -1.04 -0.52 10.8 75 7 2 0 1 2 1 0  U 1065 A G 1187 A A 1188 A G 1190 A C 1234 A U 1235 A G 1258 A C 1259 A C 1260 A C 1270 A G 1271 A G 1272 A G 1274 A A 1285 A C 1314 A U 1315 A A 1324 A C 1325 A C 1344 A G 1353 A C 1354 A G 1355 A C 1362 A A 1363 A U 1364 A G 1365 A C 1366 A C 1367 A G 1368 A C 1369 A C 2361 A 17 1.46 1.47 105.6 -0.86 -0.58 6.5 72 5 1 2 1 2 0 0  G 922 A A 923 A C 924 A A 935 A G 966 A C 967 A A 968 A C 1063 A U 1065 A C 1069 A U 1070 A U 1083 A G 1084 A U 1086 A G 1187 A A 1188 A G 1190 A G 1193 A U 1194 A C 1342 A G 1343 A C 1344 A C 1367 A G 1368 A C 1384 A G 1385 A G 1386 A C 1389 A U 1390 A A 1398 A C 1400 A 18 1.46 1.47 107.3 -0.79 -0.56 6.8 71 5 1 1 1 2 0 0  G 867 A A 919 A U 920 A U 921 A G 922 A A 923 A C 924 A A 935 A G 966 A C 967 A A 968 A U 1065 A G 1187 A A 1188 A G 1190 A C 1342 A G 1343 A C 1344 A C 1367 A G 1368 A C 1384 A G 1385 A G 1386 A G 1387 A C 1388 A C 1389 A U 1390 A U 1391 A G 1392 A U 1393 A A 1398 A C 1400 A 19 1.42 1.44 110.8 -1.32 -0.42 15.1 76 11 2 1 3 2 2 0  U 1065 A G 1187 A A 1188 A G 1190 A C 1234 A U 1235 A G 1305 A A 1306 A U 1307 A U 1308 A G 1312 A C 1320 A G 1323 A C 1325 A C 1326 A C 1327 A C 1344 A G 1353 A C 1354 A U 1364 A G 1365 A C 1366 A C 1367 A G 1368 A C 1369 A 20 1.41 1.42 112.3 -1.27 -0.57 13.4 75 10 3 2 1 2 0 0  C 924 A A 935 A G 966 A C 967 A A 968 A U 1065 A G 1187 A A 1188 A G 1190 A C 1195 A U 1196 A C 1342 A G 1343 A C 1344 A C 1367 A G 1368 A C 1384 A G 1385 A C 1397 A A 1398 A C 1399 A C 1400 A G 1401 A C 1402 A C 1403 A A 1493 A G 1494 A C 1496 A G 1497 A U 1498 A 21 1.41 1.42 111.4 -1.12 -0.57 10.8 77 7 2 3 1 2 0 0  C 924 A A 935 A G 966 A C 967 A A 968 A U 1065 A G 1187 A A 1188 A G 1190 A C 1195 A U 1196 A C 1342 A G 1343 A C 1344 A C 1367 A G 1368 A C 1384 A G 1385 A C 1397 A A 1398 A C 1399 A C 1400 A G 1401 A C 1402 A A 1492 A A 1493 A 22 1.18 1.31 121.2 -0.90 -0.53 11.3 79 7 4 2 3 3 0 0  A 8 A G 9 A A 10 A G 11 A U 12 A U 17 A C 18 A C 19 A U 20 A G 21 A A 26 A G 27 A C 503 A C 504 A G 506 A C 507 A C 508 A A 509 A G 515 A C 519 A A 520 A G 521 A C 522 A A 523 A G 524 A C 536 A G 537 A G 544 A G 550 A U 551 A G 558 A A 559 A 23 1.43 1.43 114.7 -1.24 -0.50 13.4 80 11 2 0 2 2 1 0  G 976 A U 1065 A G 1187 A A 1188 A G 1190 A C 1234 A U 1235 A U 1257 A G 1258 A C 1259 A C 1260 A A 1324 A C 1325 A C 1344 A G 1353 A C 1354 A G 1355 A G 1356 A C 1359 A A 1360 A G 1361 A C 1362 A A 1363 A U 1364 A G 1365 A C 1366 A C 1367 A G 1368 A C 1369 A C 2361 A 24 1.16 1.33 119.3 -0.68 -0.58 11.1 83 7 2 1 3 0 1 0  G 9 A U 20 A G 558 A A 559 A G 567 A G 568 A C 569 A U 580 A G 581 A A 655 A C 656 A U 743 A C 744 A C 756 A C 762 A G 821 A C 822 A G 823 A C 824 A G 853 A C 862 A U 863 A U 871 A A 872 A A 873 A G 874 A C 875 A G 876 A C 877 A 25 1.18 1.31 120.1 -0.39 -0.37 10.0 82 5 2 2 5 2 0 0  G 9 A U 20 A G 238 A U 239 A G 292 A G 293 A U 294 A G 299 A A 300 A G 301 A G 302 A G 558 A A 559 A C 564 A G 566 A G 567 A G 568 A C 569 A A 607 A A 608 A A 609 A G 610 A A 611 A A 614 A C 615 A U 626 A G 627 A G 629 A G 631 A A 632 A G 876 A C 877 A G 878 A C 879 A C 880 A 26 1.45 1.44 123.4 -1.15 -0.46 13.6 72 14 1 0 2 4 0 0  G 693 A C 719 A C 720 A A 722 A G 926 A A 935 A G 966 A C 967 A A 968 A U 1065 A G 1187 A A 1188 A G 1190 A C 1342 A G 1343 A C 1344 A C 1367 A G 1368 A C 1383 A C 1384 A A 1503 A G 1505 A A 1507 A A 1534 A 27 1.16 1.32 129.3 -0.85 -0.60 9.1 82 6 1 6 3 1 0 0  G 9 A U 12 A U 13 A U 14 A A 16 A U 17 A C 18 A C 19 A U 20 A G 21 A G 558 A A 559 A A 915 A G 916 A A 918 A C 924 A G 966 A C 1195 A U 1196 A A 1340 A U 1341 A C 1383 A C 1384 A G 1385 A C 1395 A A 1396 A C 1397 A A 1398 A C 1399 A C 1400 A G 1401 A C 1402 A C 1403 A 28 1.14 1.14 134.1 -0.91 -0.55 10.2 71 9 1 0 2 2 0 0  G 693 A A 781 A C 783 A C 784 A G 785 A U 793 A A 794 A C 795 A C 796 A C 797 A G 798 A G 926 A A 935 A G 966 A C 967 A A 968 A U 1065 A G 1187 A A 1188 A G 1190 A C 1342 A G 1343 A C 1344 A C 1367 A G 1368 A C 1383 A C 1384 A A 1503 A G 1505 A U 1506 A A 1507 A G 1516 A U 1522 A G 1523 A 29 1.21 1.39 249.9 -0.63 -0.56 9.3 82 11 2 5 6 2 0 0  G 9 A U 20 A A 50 A A 51 A G 64 A C 67 A G 68 A G 69 A U 93 A G 94 A C 96 A C 103 A G 104 A A 116 A G 117 A U 118 A A 119 A A 120 A C 121 A G 148 A A 149 A C 150 A A 151 A A 171 A A 172 A C 174 A C 175 A G 199 A G 200 A G 238 A U 239 A C 240 A G 259 A G 260 A U 261 A C 267 A G 286 A U 287 A A 288 A G 302 A A 303 A U 304 A G 318 A G 319 A C 320 A A 321 A C 322 A U 323 A C 328 A G 558 A A 559 A C 564 A G 566 A G 567 A G 568 A C 569 A G 876 A C 877 A G 878 A C 879 A C 880 A C 1424 A U 1425 A C 1437 A G 1438 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.