PDBsum entry 1vln Go to PDB code:  Pore analysis for: 1vln calculated with MOLE 2.0 PDB id 1vln Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   14 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.42 1.42 33.8 -1.51 -0.63 18.1 97 2 2 4 1 0 0 0   2 1.38 1.38 38.3 -1.21 -0.51 13.0 82 2 3 7 3 3 0 0   3 1.25 1.35 43.5 -0.31 -0.50 7.0 100 3 1 4 2 0 0 0   4 1.31 1.77 44.1 -2.01 -0.27 29.5 91 9 4 3 4 0 0 0   5 1.32 1.85 55.3 -2.29 -0.36 31.4 93 12 5 6 4 0 0 0   6 1.81 2.05 77.5 -1.77 -0.31 24.8 94 13 4 11 5 0 0 0   7 1.29 1.64 88.8 -1.57 -0.27 23.7 92 16 3 5 6 0 0 0   8 1.29 1.64 99.9 -1.49 -0.71 15.2 96 7 5 14 3 0 0 0   9 1.29 1.63 30.0 -1.37 -0.20 21.9 94 3 4 3 5 0 0 0   10 1.31 1.64 47.3 -1.72 -0.27 24.4 93 6 6 6 4 0 0 0   11 1.31 2.28 47.9 -1.75 -0.29 25.4 93 7 5 5 4 0 0 0   12 2.76 2.92 48.7 -1.73 -0.05 27.9 94 7 3 6 5 0 0 0   13 1.53 3.40 57.2 -1.75 -0.12 28.2 93 9 4 6 9 0 0 0   14 1.36 1.36 30.5 -0.62 -0.38 9.0 81 2 2 5 2 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.