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PDBsum entry 1viy
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Pore analysis for: 1viy calculated with  MOLE 2.0
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PDB id
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1viy
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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24 pores,
coloured by radius |
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23 pores,
coloured by radius
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23 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.91 |
3.97 |
30.4 |
-1.45 |
-0.11 |
22.0 |
81 |
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5 |
2 |
4 |
4 |
1 |
1 |
0 |
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2 |
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3.27 |
4.19 |
30.6 |
-1.41 |
-0.07 |
23.7 |
82 |
5 |
2 |
5 |
4 |
1 |
0 |
0 |
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3 |
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1.44 |
1.58 |
37.1 |
-0.81 |
-0.33 |
14.1 |
83 |
2 |
4 |
5 |
5 |
1 |
1 |
0 |
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4 |
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1.64 |
3.67 |
37.8 |
-1.35 |
-0.26 |
8.8 |
86 |
3 |
3 |
7 |
5 |
4 |
0 |
0 |
SO4 218 B
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5 |
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2.11 |
3.19 |
40.9 |
-0.75 |
-0.18 |
8.8 |
76 |
0 |
2 |
4 |
4 |
2 |
2 |
0 |
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6 |
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2.61 |
2.77 |
43.4 |
-2.26 |
-0.46 |
14.8 |
80 |
3 |
3 |
7 |
3 |
2 |
2 |
0 |
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7 |
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2.88 |
3.18 |
45.2 |
-2.11 |
-0.43 |
18.8 |
85 |
3 |
4 |
7 |
4 |
1 |
0 |
0 |
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8 |
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2.77 |
2.84 |
47.6 |
-1.89 |
-0.53 |
12.0 |
86 |
4 |
3 |
11 |
4 |
2 |
0 |
0 |
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9 |
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1.64 |
3.64 |
48.7 |
-0.89 |
-0.21 |
7.5 |
82 |
5 |
0 |
8 |
4 |
4 |
2 |
0 |
SO4 218 B
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10 |
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2.87 |
3.16 |
52.8 |
-1.90 |
-0.43 |
18.4 |
87 |
8 |
6 |
8 |
7 |
1 |
0 |
0 |
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11 |
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2.61 |
2.77 |
53.0 |
-1.84 |
-0.53 |
10.2 |
85 |
5 |
1 |
12 |
3 |
2 |
2 |
0 |
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12 |
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2.61 |
2.78 |
53.8 |
-1.99 |
-0.32 |
20.9 |
79 |
5 |
1 |
7 |
3 |
1 |
2 |
0 |
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13 |
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1.60 |
3.67 |
55.8 |
-0.88 |
0.00 |
15.8 |
87 |
7 |
3 |
8 |
7 |
3 |
0 |
0 |
SO4 218 B
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14 |
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1.62 |
3.64 |
56.3 |
-0.89 |
-0.15 |
13.6 |
85 |
10 |
3 |
7 |
8 |
3 |
0 |
0 |
SO4 218 B
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15 |
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3.18 |
4.22 |
59.9 |
-1.78 |
-0.25 |
19.0 |
88 |
7 |
4 |
11 |
7 |
1 |
0 |
0 |
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16 |
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2.90 |
3.26 |
60.5 |
-1.70 |
-0.45 |
15.7 |
87 |
9 |
4 |
11 |
7 |
1 |
0 |
0 |
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17 |
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2.88 |
3.26 |
62.9 |
-1.84 |
-0.26 |
25.9 |
84 |
10 |
4 |
7 |
7 |
0 |
0 |
0 |
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18 |
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2.81 |
2.84 |
62.9 |
-1.60 |
-0.19 |
21.7 |
84 |
8 |
3 |
9 |
6 |
1 |
0 |
0 |
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19 |
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1.45 |
1.57 |
68.0 |
-1.24 |
-0.31 |
7.5 |
87 |
7 |
3 |
13 |
5 |
4 |
0 |
0 |
SO4 218 B
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20 |
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2.95 |
3.26 |
68.2 |
-1.66 |
-0.18 |
25.6 |
85 |
12 |
6 |
7 |
9 |
0 |
0 |
0 |
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21 |
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1.66 |
3.83 |
79.1 |
-1.28 |
-0.20 |
13.0 |
83 |
6 |
2 |
10 |
5 |
4 |
1 |
0 |
SO4 218 B
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22 |
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2.74 |
2.81 |
86.2 |
-1.90 |
-0.37 |
18.3 |
80 |
7 |
2 |
11 |
4 |
2 |
1 |
0 |
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23 |
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1.66 |
3.70 |
95.9 |
-1.14 |
-0.38 |
9.0 |
85 |
7 |
3 |
13 |
6 |
4 |
0 |
0 |
SO4 218 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program