PDBsum entry 1viy Go to PDB code:  Tunnel analysis for: 1viy calculated with MOLE 2.0 PDB id 1viy Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 1.24 29.6 -1.81 -0.35 20.9 76 3 2 4 4 1 1 0   2 1.24 1.26 37.9 -0.33 -0.15 12.8 82 3 3 3 7 0 1 0   3 1.25 1.29 40.1 -0.57 -0.16 10.5 81 3 1 6 7 1 1 0   4 1.24 1.24 62.5 -0.37 0.09 15.3 80 7 1 6 15 1 1 0   5 1.25 1.22 62.5 -1.42 -0.17 22.2 81 8 4 6 12 1 1 0   6 1.25 1.28 64.7 -1.76 -0.34 15.7 82 6 4 9 10 2 1 0   7 1.24 1.24 72.0 -1.50 -0.42 12.4 84 7 2 14 9 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.