PDBsum entry 1v5y Go to PDB code:  Tunnel analysis for: 1v5y calculated with MOLE 2.0 PDB id 1v5y Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.90 1.96 16.0 -0.08 -0.11 10.8 82 1 1 3 1 3 0 0  FMN 1454 A 4HC 1201 B 2 1.90 1.97 26.9 -0.60 -0.23 11.3 82 2 2 3 3 2 1 0  FMN 1454 A 4HC 1201 B 3 1.77 2.46 27.6 -1.84 -0.60 15.1 89 4 1 5 0 1 0 0  FMN 1454 A 4HC 1201 B 4 1.90 1.96 27.7 -1.11 -0.29 11.9 87 2 1 5 3 2 0 0  FMN 1454 A 4HC 1201 B 5 1.37 1.60 34.8 -1.22 -0.51 13.5 87 4 2 5 4 1 0 0  FMN 1454 A 4HC 1201 B 6 1.12 3.02 15.8 2.39 0.84 5.2 83 1 1 1 7 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.