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PDBsum entry 1v2e

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 1v2e calculated with MOLE 2.0 PDB id
1v2e
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.29 1.45 51.3 0.05 0.09 8.5 80 5 1 4 7 7 0 0  PLP 1510 B KMT 1520 B
2 1.31 1.46 20.4 -1.80 -0.56 11.6 72 2 2 3 0 3 2 0  
3 1.20 3.28 16.9 1.71 0.45 1.4 56 0 0 0 5 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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