PDBsum entry 1v25 Go to PDB code:  Tunnel analysis for: 1v25 calculated with MOLE 2.0 PDB id 1v25 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.27 1.99 39.8 -0.09 0.13 10.1 77 3 0 1 7 4 1 0  ANP 666 A 2 1.16 1.16 39.9 -1.07 -0.45 12.1 79 2 3 3 4 3 0 0  ANP 666 A 3 1.27 1.96 40.7 -1.05 -0.28 12.2 79 4 1 2 4 4 0 0  ANP 666 A MG 1001 A 4 1.25 1.41 58.5 -0.84 -0.13 14.8 80 6 1 2 7 4 1 0  ANP 666 A 5 1.27 1.32 65.0 -0.95 -0.24 14.9 76 7 4 1 6 4 2 0  ANP 666 A 6 1.16 2.03 24.1 -0.63 -0.14 19.0 67 3 2 0 5 3 2 0   7 1.14 1.98 28.1 -0.80 -0.10 24.3 70 2 4 0 4 2 1 0   8 1.34 1.47 23.2 -1.62 -0.48 23.2 67 3 1 0 2 3 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.