PDBsum entry 1tp7 Go to PDB code:  Tunnel analysis for: 1tp7 calculated with MOLE 2.0 PDB id 1tp7 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.17 1.15 86.8 -0.33 -0.07 12.4 79 7 8 3 11 4 2 1  MSE 154 B 2 1.73 2.67 23.9 -2.00 -0.49 20.7 91 4 2 4 1 1 0 0   3 1.68 2.64 38.0 -2.41 -0.58 29.9 83 6 7 3 1 1 1 0   4 1.69 2.58 39.8 -2.13 -0.40 24.9 84 6 6 5 2 2 1 0   5 1.25 1.35 16.0 -1.44 -0.44 16.9 83 3 1 1 3 0 0 0   6 1.34 1.34 18.2 -1.90 -0.88 22.0 85 2 3 3 0 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.