PDBsum entry 1rt2 Go to PDB code:  Tunnel analysis for: 1rt2 calculated with MOLE 2.0 PDB id 1rt2 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.09 2.19 46.1 -0.74 0.04 17.8 72 6 1 4 8 1 1 0   2 1.14 1.60 25.4 1.51 0.48 5.5 82 1 1 1 7 1 0 0   3 1.13 1.54 33.9 1.37 0.51 7.6 77 4 0 1 8 1 1 1   4 1.14 1.60 35.5 1.54 0.59 6.2 80 4 0 2 9 1 1 1   5 1.10 1.94 15.5 1.98 0.40 2.8 86 0 1 1 6 1 0 0   6 1.30 1.35 21.9 -2.11 -0.53 26.8 85 2 0 0 1 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.