 |
PDBsum entry 1qiv
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 1qiv calculated with MOLE 2.0
|
PDB id
|
|
|
|
1qiv
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
0 pores,
coloured by radius |
 |
4 pores,
coloured by radius
|
4 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
3.52 |
5.29 |
26.1 |
1.24 |
0.58 |
9.1 |
84 |
 |
1 |
4 |
0 |
13 |
2 |
0 |
0 |
 |
DPD 153 A DPD 154 A
|
 |
 |
2 |
 |
2.71 |
4.47 |
27.1 |
0.70 |
0.36 |
10.2 |
80 |
0 |
4 |
1 |
10 |
2 |
1 |
0 |
DPD 153 A DPD 154 A
|
 |
3 |
 |
3.20 |
3.55 |
35.0 |
0.82 |
0.44 |
11.3 |
82 |
1 |
5 |
1 |
12 |
3 |
0 |
0 |
DPD 153 A DPD 154 A
|
 |
4 |
 |
2.71 |
4.50 |
36.0 |
0.48 |
0.29 |
11.4 |
78 |
0 |
5 |
2 |
9 |
3 |
1 |
0 |
DPD 153 A DPD 154 A
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |