PDBsum entry 1qiv Go to PDB code:  Tunnel analysis for: 1qiv calculated with MOLE 2.0 PDB id 1qiv Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.82 3.20 24.8 1.67 0.65 5.8 74 0 2 1 9 3 0 0  DPD 153 A DPD 154 A 2 1.81 3.19 26.1 1.37 0.50 10.1 77 0 4 0 10 2 0 0  DPD 153 A DPD 154 A 3 1.81 3.19 26.4 2.23 0.78 6.2 77 0 2 1 8 2 0 0  DPD 153 A DPD 154 A 4 1.80 3.17 27.9 1.51 0.62 9.6 76 0 3 1 9 2 0 0  DPD 153 A DPD 154 A 5 1.82 3.20 28.2 1.61 0.62 9.2 77 0 5 0 10 2 0 0  DPD 153 A DPD 154 A 6 1.81 3.19 29.5 1.76 0.74 8.5 80 1 3 0 12 2 0 0  DPD 153 A DPD 154 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.