PDBsum entry 1q9m Go to PDB code:  Pore analysis for: 1q9m calculated with MOLE 2.0 PDB id 1q9m Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.86 2.20 78.0 -2.18 -0.36 34.9 84 16 14 3 8 0 2 0   2 1.76 1.76 103.8 -2.24 -0.52 28.0 83 11 10 9 8 1 2 0   3 1.75 1.80 104.4 -1.91 -0.41 27.9 83 11 11 9 9 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.