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PDBsum entry 1q55
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Tunnel analysis for: 1q55 calculated with  MOLE 2.0
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PDB id
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1q55
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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21 tunnels,
coloured by tunnel radius |
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21 tunnels,
coloured by
tunnel radius
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21 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.19 |
1.53 |
22.5 |
2.29 |
1.00 |
3.4 |
84 |
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2 |
0 |
1 |
8 |
2 |
2 |
0 |
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2 |
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1.19 |
1.53 |
31.8 |
1.36 |
0.59 |
6.0 |
88 |
1 |
1 |
2 |
9 |
2 |
1 |
0 |
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3 |
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1.16 |
2.69 |
34.4 |
0.14 |
0.13 |
14.6 |
85 |
1 |
5 |
1 |
7 |
2 |
0 |
0 |
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4 |
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1.20 |
1.60 |
16.9 |
2.06 |
0.65 |
2.4 |
92 |
1 |
0 |
0 |
6 |
1 |
0 |
0 |
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5 |
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1.24 |
1.59 |
18.4 |
2.11 |
0.66 |
2.2 |
93 |
1 |
0 |
0 |
7 |
1 |
0 |
0 |
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6 |
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1.33 |
2.20 |
19.8 |
1.40 |
0.55 |
2.5 |
78 |
1 |
0 |
0 |
6 |
2 |
1 |
0 |
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7 |
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1.33 |
2.21 |
19.8 |
1.40 |
0.55 |
2.5 |
78 |
1 |
0 |
0 |
6 |
2 |
1 |
0 |
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8 |
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1.33 |
2.21 |
19.8 |
1.40 |
0.55 |
2.5 |
78 |
1 |
0 |
0 |
6 |
2 |
1 |
0 |
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9 |
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1.33 |
2.20 |
19.8 |
1.40 |
0.55 |
2.5 |
78 |
1 |
0 |
0 |
6 |
2 |
1 |
0 |
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10 |
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1.13 |
2.51 |
31.1 |
1.87 |
0.77 |
5.5 |
74 |
1 |
1 |
0 |
9 |
4 |
0 |
0 |
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11 |
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1.23 |
2.20 |
35.4 |
2.53 |
0.84 |
1.6 |
79 |
0 |
1 |
1 |
10 |
4 |
1 |
0 |
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12 |
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1.13 |
2.71 |
31.1 |
1.82 |
0.76 |
5.7 |
74 |
1 |
1 |
0 |
9 |
4 |
0 |
0 |
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13 |
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1.23 |
2.20 |
35.4 |
2.53 |
0.84 |
1.6 |
79 |
0 |
1 |
1 |
10 |
4 |
1 |
0 |
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14 |
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1.13 |
2.71 |
31.1 |
1.82 |
0.76 |
5.7 |
74 |
1 |
1 |
0 |
9 |
4 |
0 |
0 |
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15 |
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1.23 |
2.20 |
35.4 |
2.53 |
0.84 |
1.6 |
79 |
0 |
1 |
1 |
10 |
4 |
1 |
0 |
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16 |
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1.13 |
2.71 |
31.1 |
1.82 |
0.76 |
5.7 |
74 |
1 |
1 |
0 |
9 |
4 |
0 |
0 |
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17 |
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1.23 |
2.20 |
35.4 |
2.53 |
0.84 |
1.6 |
79 |
0 |
1 |
1 |
10 |
4 |
1 |
0 |
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18 |
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1.36 |
2.91 |
17.3 |
-0.09 |
0.32 |
3.4 |
63 |
1 |
0 |
0 |
3 |
2 |
1 |
0 |
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19 |
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1.36 |
2.91 |
17.3 |
-0.09 |
0.32 |
3.4 |
63 |
1 |
0 |
0 |
3 |
2 |
1 |
0 |
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20 |
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1.36 |
2.91 |
16.9 |
-0.52 |
-0.04 |
4.9 |
67 |
1 |
0 |
0 |
3 |
2 |
2 |
0 |
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21 |
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1.22 |
1.58 |
17.4 |
1.73 |
0.74 |
2.5 |
84 |
1 |
0 |
0 |
6 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program