PDBsum entry 1q55 Go to PDB code:  Pore analysis for: 1q55 calculated with MOLE 2.0 PDB id 1q55 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   13 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 1.58 34.8 1.81 0.79 5.6 83 3 0 0 9 2 2 0   2 1.15 1.79 38.3 0.02 0.12 17.3 88 2 5 2 8 1 0 0   3 1.22 3.28 42.3 0.60 0.40 11.8 79 3 2 0 10 2 2 0   4 1.24 3.26 96.0 -0.50 0.01 15.6 77 7 7 2 10 3 2 0   5 1.41 1.49 26.1 -1.33 -0.57 16.7 87 0 6 4 3 0 2 0   6 1.17 2.39 31.7 1.03 0.43 7.4 93 2 2 2 8 0 1 0   7 1.25 3.02 32.9 0.13 0.00 13.4 93 0 5 3 8 0 1 0   8 1.38 2.47 50.4 0.71 0.31 8.7 83 0 3 2 9 2 3 0   9 1.21 1.59 56.5 1.08 0.41 6.4 82 1 3 1 10 3 2 0   10 1.21 3.27 56.9 0.72 0.38 10.9 75 4 3 1 9 3 2 0   11 1.09 3.39 33.2 2.19 0.85 1.9 73 0 1 0 12 3 0 0   12 1.09 3.39 33.2 2.19 0.85 1.9 73 0 1 0 12 3 0 0   13 2.43 2.53 44.1 -1.00 -0.33 6.8 81 2 0 2 1 2 2 0   14 2.43 2.53 44.1 -1.03 -0.32 7.0 81 2 0 2 1 2 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.