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PDBsum entry 1oiu

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1oiu calculated with MOLE 2.0 PDB id
1oiu
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.57 3.69 31.0 -2.12 -0.61 27.0 87 6 2 1 1 0 0 0  SGM 1193 D
2 1.95 3.58 43.3 -1.52 -0.40 21.5 83 6 3 3 4 0 1 0  SGM 1193 B SGM 1193 D
3 1.95 3.87 47.0 -1.32 -0.40 17.3 84 5 3 3 3 0 2 0  
4 1.67 2.09 68.3 -1.46 -0.45 22.2 82 8 5 3 3 1 1 0  N76 1298 C SGM 1193 D
5 1.49 3.13 83.9 -2.31 -0.60 25.8 86 9 3 3 2 0 1 0  
6 1.63 2.10 90.8 -1.51 -0.40 22.4 80 8 5 3 5 1 2 0  N76 1298 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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