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PDBsum entry 1odh
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Pore analysis for: 1odh calculated with  MOLE 2.0
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PDB id
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1odh
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.19 |
1.68 |
27.9 |
-0.70 |
-0.21 |
13.4 |
79 |
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3 |
1 |
2 |
1 |
2 |
0 |
0 |
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DA 1013 C DC 1016 D DA 1017 D
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2 |
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1.24 |
1.65 |
30.0 |
-0.64 |
-0.20 |
10.0 |
85 |
2 |
1 |
4 |
2 |
2 |
0 |
0 |
DG 1008 C DG 1009 C DT 1010 C DT 1014 D DG 1015 D
DC 1016 D
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3 |
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1.25 |
1.33 |
34.8 |
-1.11 |
-0.58 |
15.3 |
83 |
4 |
1 |
1 |
0 |
1 |
0 |
1 |
DG 1002 C DT 1004 C DG 1005 C DC 1006 C DA 1013 C
DC 1016 D DA 1017 D DC 1018 D DC 1019 D DC 1020 D
DG 1021 D DC 1022 D
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4 |
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1.10 |
1.23 |
40.7 |
-1.02 |
-0.34 |
17.9 |
81 |
4 |
2 |
3 |
4 |
0 |
0 |
1 |
DC 1001 C DG 1002 C DT 1004 C DG 1005 C DC 1006 C
DG 1021 D DC 1022 D DG 1026 D
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5 |
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1.12 |
1.27 |
41.6 |
-1.04 |
-0.51 |
15.6 |
87 |
4 |
2 |
2 |
3 |
0 |
0 |
1 |
DC 1001 C DG 1002 C DA 1003 C DT 1004 C DG 1005 C
DC 1006 C DG 1021 D DC 1022 D DG 1026 D
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6 |
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1.20 |
1.33 |
48.2 |
-0.99 |
-0.50 |
13.7 |
86 |
6 |
1 |
4 |
3 |
1 |
0 |
0 |
DT 1004 C DC 1006 C DA 1013 C DC 1016 D DA 1017 D
DC 1018 D DC 1019 D DC 1020 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program