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PDBsum entry 1odh
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Tunnel analysis for: 1odh calculated with  MOLE 2.0
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PDB id
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1odh
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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18 tunnels,
coloured by tunnel radius |
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17 tunnels,
coloured by
tunnel radius
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17 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.32 |
1.51 |
18.4 |
-1.69 |
-0.54 |
15.2 |
80 |
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2 |
0 |
1 |
1 |
0 |
2 |
0 |
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DC 1018 D DC 1019 D
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2 |
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1.86 |
1.86 |
18.4 |
-0.65 |
-0.24 |
14.3 |
76 |
1 |
1 |
1 |
0 |
0 |
0 |
1 |
DG 1002 C DT 1004 C DG 1005 C DC 1006 C DG 1021 D
DC 1022 D
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3 |
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1.41 |
1.55 |
18.7 |
-0.53 |
-0.02 |
10.6 |
77 |
3 |
0 |
3 |
3 |
1 |
0 |
0 |
DT 1004 C
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4 |
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2.09 |
2.09 |
19.4 |
-2.07 |
-0.84 |
22.3 |
86 |
1 |
1 |
2 |
0 |
0 |
0 |
0 |
DT 1004 C DG 1005 C DC 1006 C DC 1019 D DC 1020 D
DG 1021 D
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5 |
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1.96 |
1.96 |
21.7 |
-1.17 |
-0.56 |
18.7 |
77 |
2 |
1 |
1 |
0 |
0 |
0 |
1 |
DG 1002 C DT 1004 C DG 1005 C DC 1006 C DC 1018 D
DC 1019 D DC 1020 D DG 1021 D DC 1022 D
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6 |
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1.96 |
1.96 |
22.0 |
-1.78 |
-0.82 |
21.1 |
81 |
2 |
1 |
1 |
0 |
0 |
0 |
0 |
DT 1004 C DC 1006 C DC 1018 D DC 1019 D DC 1020 D
DG 1021 D
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7 |
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1.13 |
1.48 |
22.3 |
-0.85 |
-0.54 |
10.9 |
89 |
3 |
0 |
1 |
0 |
1 |
0 |
0 |
DA 1013 C DC 1016 D DA 1017 D DC 1018 D DC 1019 D
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8 |
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1.12 |
1.25 |
22.7 |
-0.34 |
-0.26 |
11.5 |
85 |
3 |
0 |
3 |
4 |
0 |
0 |
0 |
DT 1004 C DG 1005 C
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9 |
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1.17 |
1.17 |
28.3 |
-1.72 |
-0.71 |
14.3 |
98 |
2 |
0 |
4 |
0 |
0 |
0 |
0 |
DG 1015 D DC 1016 D DA 1017 D DC 1018 D DC 1019 D
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10 |
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1.34 |
1.58 |
29.8 |
-1.06 |
-0.32 |
14.8 |
87 |
3 |
1 |
2 |
4 |
1 |
0 |
0 |
DG 1002 C DA 1003 C DT 1004 C DG 1026 D
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11 |
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1.08 |
1.21 |
32.8 |
-0.94 |
-0.47 |
15.4 |
93 |
3 |
1 |
2 |
3 |
0 |
0 |
0 |
DG 1002 C DA 1003 C DT 1004 C DG 1005 C DG 1026 D
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12 |
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1.13 |
1.48 |
32.7 |
-1.32 |
-0.58 |
14.4 |
90 |
3 |
1 |
2 |
0 |
1 |
0 |
0 |
DT 1004 C DG 1005 C DC 1006 C DA 1013 C DC 1016 D
DA 1017 D DC 1018 D DC 1019 D DC 1020 D
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13 |
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1.21 |
1.32 |
36.2 |
-0.84 |
-0.27 |
12.7 |
82 |
2 |
1 |
3 |
2 |
1 |
0 |
1 |
DG 1002 C DT 1004 C DG 1005 C DC 1006 C DG 1021 D
DC 1022 D
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14 |
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1.15 |
1.29 |
38.1 |
-1.39 |
-0.42 |
17.9 |
85 |
5 |
0 |
2 |
3 |
0 |
1 |
0 |
DA 1003 C DT 1004 C DG 1005 C
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15 |
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1.15 |
1.15 |
38.8 |
-1.96 |
-0.72 |
16.3 |
97 |
2 |
1 |
5 |
0 |
0 |
0 |
0 |
DT 1004 C DG 1005 C DC 1006 C DG 1015 D DC 1016 D
DA 1017 D DC 1018 D DC 1019 D DC 1020 D
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16 |
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1.12 |
1.27 |
45.1 |
-1.19 |
-0.57 |
15.7 |
91 |
4 |
2 |
2 |
3 |
0 |
0 |
0 |
DG 1002 C DA 1003 C DT 1004 C DC 1006 C DC 1018 D
DC 1019 D DC 1020 D DG 1026 D
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17 |
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1.16 |
1.48 |
49.8 |
-1.00 |
-0.37 |
12.9 |
88 |
4 |
1 |
4 |
2 |
2 |
0 |
0 |
DT 1004 C DC 1006 C DA 1013 C DC 1016 D DA 1017 D
DC 1018 D DC 1019 D DC 1020 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program