PDBsum entry 1o1a Go to PDB code:  Tunnel analysis for: 1o1a calculated with MOLE 2.0 PDB id 1o1a Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   25 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 3.41 41.2 2.34 0.61 2.8 86 2 0 1 14 0 1 1   2 1.20 3.04 54.2 1.04 0.32 9.9 85 3 2 2 15 0 1 1  MLY 764 M 3 1.18 1.19 28.6 0.58 0.28 8.3 81 2 2 2 6 2 0 0   4 1.18 1.20 38.0 1.68 0.59 3.6 81 1 2 3 11 3 0 0   5 1.16 1.18 44.7 1.10 0.47 8.3 80 2 5 2 11 3 0 0   6 1.16 1.18 48.0 1.15 0.49 7.4 77 2 5 2 11 4 1 0   7 1.16 1.18 48.2 1.33 0.49 5.3 79 2 1 2 11 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.