PDBsum entry 1nd0 Go to PDB code:  Pore analysis for: 1nd0 calculated with MOLE 2.0 PDB id 1nd0 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   12 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.22 3.73 29.0 -2.87 -0.38 32.9 78 5 2 1 0 1 2 0   2 2.63 2.66 36.3 -1.03 -0.69 10.8 84 1 3 3 2 1 2 0   3 2.30 4.03 39.7 -1.54 -0.44 13.8 79 2 3 1 1 1 2 0   4 2.24 4.06 51.0 -1.75 -0.51 17.4 80 3 4 1 1 1 3 0   5 1.57 2.40 57.5 -1.89 -0.67 17.9 88 4 2 7 3 2 0 0   6 1.58 2.40 61.4 -1.54 -0.59 14.3 82 3 1 6 4 1 2 0   7 1.46 3.83 66.4 -2.36 -0.45 24.3 78 6 4 3 0 3 4 0   8 1.53 1.53 69.8 -1.70 -0.61 10.9 85 3 4 5 0 1 2 0   9 1.46 3.84 78.8 -1.89 -0.37 20.0 78 6 4 4 1 3 5 0   10 1.15 1.41 81.0 -1.13 -0.58 14.3 89 4 4 7 2 2 1 0   11 1.54 1.65 82.2 -1.37 -0.49 9.3 84 3 4 6 1 1 3 0   12 1.70 1.70 82.0 -0.63 -0.52 10.3 96 1 3 8 4 1 0 0   13 1.19 1.47 207.8 -1.11 -0.40 11.5 81 9 7 17 7 10 3 0  DP4 404 G Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.