spacer
spacer

PDBsum entry 1mgo

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1mgo calculated with MOLE 2.0 PDB id
1mgo
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
0 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.63 2.61 41.0 0.48 -0.03 9.1 86 1 2 3 11 0 0 1  NAD 377 B MPD 602 B
2 1.86 3.61 45.9 0.41 -0.01 10.2 88 2 2 3 11 0 0 1  NAD 377 A PFB 601 B
3 1.11 1.59 49.2 0.07 -0.16 9.2 87 4 1 3 7 1 0 2  NAD 377 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer