PDBsum entry 1ldj Go to PDB code:  Pore analysis for: 1ldj calculated with MOLE 2.0 PDB id 1ldj Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.06 2.34 25.2 0.35 -0.03 4.3 90 1 1 4 6 1 0 0   2 1.82 1.82 26.7 -2.43 -0.46 23.3 74 4 3 2 1 2 1 0   3 1.50 2.08 67.1 -0.72 -0.40 10.3 83 2 5 5 7 0 0 1   4 1.34 2.55 78.0 -1.42 -0.45 15.1 79 6 7 5 7 2 1 0   5 1.67 2.50 88.6 -2.36 -0.54 22.2 84 8 6 11 4 1 1 0   6 1.45 2.58 96.3 -2.55 -0.47 26.4 80 12 8 10 4 3 1 0   7 1.54 2.06 136.5 -1.57 -0.42 18.7 83 12 9 11 9 1 0 0   8 1.27 1.28 97.5 -0.85 -0.10 20.8 74 4 4 1 4 3 1 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.