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PDBsum entry 1k8c

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1k8c calculated with MOLE 2.0 PDB id
1k8c
Pores calculated on whole structure Pores calculated excluding ligands

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0 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.06 3.26 58.1 -1.45 0.00 12.4 74 6 2 5 2 7 1 0  NAP 2350 B
2 2.07 3.40 43.5 -1.89 -0.49 19.4 85 3 1 5 3 2 1 0  NAP 4350 D
3 2.15 3.31 29.2 -1.54 0.13 14.4 73 3 2 4 2 7 0 0  NAP 3350 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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