PDBsum entry 1jqj Go to PDB code:  Pore analysis for: 1jqj calculated with MOLE 2.0 PDB id 1jqj Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.81 1.95 37.7 -1.14 0.10 19.3 79 4 2 2 4 3 0 1   2 1.27 1.39 47.7 -1.63 -0.57 15.5 76 2 4 2 3 1 1 0   3 1.80 1.95 57.5 -1.51 -0.16 19.3 79 5 3 4 4 4 1 1   4 1.16 1.45 29.3 -2.84 -0.61 32.9 81 2 3 2 0 1 0 0   5 1.64 1.85 49.9 -2.20 -0.48 28.8 83 4 2 2 1 1 2 0   6 1.55 1.74 26.8 -1.07 -0.44 14.7 73 3 1 0 2 0 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.