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PDBsum entry 1jqj
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Tunnel analysis for: 1jqj calculated with  MOLE 2.0
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PDB id
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1jqj
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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10 tunnels,
coloured by tunnel radius |
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10 tunnels,
coloured by
tunnel radius
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10 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.29 |
2.13 |
22.7 |
0.94 |
0.13 |
9.2 |
67 |
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3 |
1 |
0 |
9 |
0 |
0 |
1 |
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2 |
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1.27 |
2.19 |
23.2 |
0.92 |
0.09 |
7.8 |
68 |
1 |
1 |
1 |
9 |
0 |
0 |
0 |
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3 |
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1.19 |
2.28 |
17.5 |
2.05 |
0.69 |
5.5 |
68 |
1 |
0 |
0 |
9 |
1 |
0 |
0 |
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4 |
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1.18 |
2.15 |
29.9 |
1.83 |
0.68 |
6.0 |
84 |
1 |
1 |
0 |
11 |
2 |
1 |
0 |
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5 |
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1.58 |
1.68 |
16.1 |
-0.91 |
-0.20 |
14.4 |
74 |
2 |
2 |
0 |
3 |
1 |
1 |
0 |
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6 |
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1.09 |
3.59 |
29.1 |
1.73 |
0.72 |
4.8 |
66 |
2 |
1 |
1 |
9 |
2 |
0 |
0 |
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7 |
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1.25 |
2.53 |
27.4 |
2.36 |
0.83 |
3.5 |
84 |
1 |
0 |
0 |
10 |
2 |
1 |
0 |
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8 |
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1.39 |
2.24 |
29.6 |
2.21 |
0.76 |
3.9 |
82 |
1 |
0 |
1 |
9 |
3 |
1 |
0 |
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9 |
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1.30 |
1.30 |
18.1 |
-1.33 |
-0.74 |
15.4 |
86 |
2 |
2 |
2 |
2 |
1 |
0 |
0 |
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10 |
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1.26 |
1.26 |
15.1 |
-1.77 |
-0.63 |
8.9 |
77 |
2 |
0 |
2 |
1 |
0 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program