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PDBsum entry 1jpa

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Transferase PDB id
1jpa
Contents
Protein chains
273 a.a. *
Ligands
ANP ×2
Waters ×260
* Residue conservation analysis

References listed in PDB file
Key reference
Title Structural basis for autoinhibition of the ephb2 receptor tyrosine kinase by the unphosphorylated juxtamembrane region.
Authors L.E.Wybenga-Groot, B.Baskin, S.H.Ong, J.Tong, T.Pawson, F.Sicheri.
Ref. Cell, 2001, 106, 745-757. [DOI no: 10.1016/S0092-8674(01)00496-2]
PubMed id 11572780
Abstract
The Eph receptor tyrosine kinase family is regulated by autophosphorylation within the juxtamembrane region and the kinase activation segment. We have solved the X-ray crystal structure to 1.9 A resolution of an autoinhibited, unphosphorylated form of EphB2 comprised of the juxtamembrane region and the kinase domain. The structure, supported by mutagenesis data, reveals that the juxtamembrane segment adopts a helical conformation that distorts the small lobe of the kinase domain, and blocks the activation segment from attaining an activated conformation. Phosphorylation of conserved juxtamembrane tyrosines would relieve this autoinhibition by disturbing the association of the juxtamembrane segment with the kinase domain, while liberating phosphotyrosine sites for binding SH2 domains of target proteins. We propose that the autoinhibitory mechanism employed by EphB2 is a more general device through which receptor tyrosine kinases are controlled.
Figure 4.
Figure 4. Electrostatic Surface Representation of EphB2Blue and red regions indicate positive and negative potential, respectively (10 to −10 k[B]T). Phosphoregulatory residues Tyr/Phe604 and Tyr/Phe610 are colored light blue. The molecular surface of EphB2 is oriented as in Figure 2a and was generated using GRASP (Nicholls et al., 1991)
Figure 6.
Figure 6. Schematic Diagram Highlighting Difference between the Autoinhibited and Active States of the Eph Receptor Family of Tyrosine KinasesThe active configuration is based on the crystal structure of active IRK (Protein Data Bank ID 1ir3). Dashed lines indicate regions of activation segment disorder. The numbering scheme corresponds to murine EphB2
The above figures are reprinted by permission from Cell Press: Cell (2001, 106, 745-757) copyright 2001.
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