PDBsum entry 1jpa Go to PDB code:  Pore analysis for: 1jpa calculated with MOLE 2.0 PDB id 1jpa Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.72 1.76 44.9 -0.62 -0.39 12.2 89 2 4 5 5 1 0 0   2 2.38 3.57 50.1 -0.77 -0.36 15.3 85 2 5 4 3 2 0 0   3 1.87 1.88 50.5 -2.34 -0.56 27.9 87 6 5 4 3 1 0 0   4 1.86 1.91 51.4 -1.21 -0.34 19.7 89 5 2 4 4 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.