PDBsum entry 1jkt Go to PDB code:  Tunnel analysis for: 1jkt calculated with MOLE 2.0 PDB id 1jkt Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.10 1.11 27.2 3.02 1.00 0.7 77 0 0 1 11 2 0 0   2 1.10 1.11 39.2 2.94 1.05 3.5 73 1 1 1 11 3 0 0   3 1.30 2.67 18.9 0.81 0.20 6.4 72 1 0 0 3 4 0 0   4 1.16 1.68 23.9 0.91 0.18 6.2 75 1 0 0 4 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.