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PDBsum entry 1jk1
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Tunnel analysis for: 1jk1 calculated with  MOLE 2.0
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PDB id
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1jk1
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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5 tunnels,
coloured by tunnel radius |
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5 tunnels,
coloured by
tunnel radius
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5 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.12 |
1.30 |
23.3 |
-1.90 |
-0.49 |
24.5 |
87 |
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4 |
2 |
2 |
1 |
1 |
0 |
0 |
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DG 6 B DC 53 C DG 54 C
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2 |
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1.68 |
1.90 |
24.5 |
-1.51 |
-0.40 |
21.4 |
78 |
2 |
1 |
1 |
0 |
1 |
1 |
0 |
DC 52 C DC 53 C
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3 |
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1.54 |
1.54 |
15.2 |
-1.76 |
-0.60 |
21.6 |
87 |
2 |
1 |
1 |
0 |
1 |
0 |
0 |
DT 5 B DC 55 C DC 56 C DC 57 C DA 58 C
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4 |
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1.23 |
1.49 |
15.9 |
-0.67 |
-0.59 |
10.0 |
92 |
3 |
0 |
0 |
1 |
0 |
0 |
0 |
DG 2 B DC 3 B
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5 |
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1.31 |
1.45 |
18.0 |
-1.47 |
-0.48 |
22.9 |
82 |
4 |
1 |
0 |
1 |
1 |
0 |
0 |
DG 2 B DC 3 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program